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Alternative models for two crystal structures of Candida albicans 3,4-dihydroxy-2-butanone 4-phosphate synthase- alternate interpreation
Crystallization Crystal Properties Matthews coefficient Solvent content 2.19 43.94
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 109.597 α = 90 b = 47.9 β = 70.62 c = 40.2 γ = 90
Symmetry Space Group C 1 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 IMAGE PLATE MARRESEARCH 2003-07-03 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE RIGAKU RU200 1.542
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.66 51.71 20361
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION THROUGHOUT 1.7 51.71 20361 1050 93 0.187 0.185 0.1912 0.215 0.2204 RANDOM 13.836
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.85 0.33 0.85 -0.21
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 31.63 r_dihedral_angle_3_deg 13.904 r_dihedral_angle_4_deg 9.066 r_dihedral_angle_1_deg 5.412 r_scangle_it 2.398 r_scbond_it 1.448 r_angle_refined_deg 1.129 r_mcangle_it 0.764 r_mcbond_it 0.468 r_nbtor_refined 0.304
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 31.63 r_dihedral_angle_3_deg 13.904 r_dihedral_angle_4_deg 9.066 r_dihedral_angle_1_deg 5.412 r_scangle_it 2.398 r_scbond_it 1.448 r_angle_refined_deg 1.129 r_mcangle_it 0.764 r_mcbond_it 0.468 r_nbtor_refined 0.304 r_symmetry_hbond_refined 0.211 r_nbd_refined 0.207 r_symmetry_vdw_refined 0.124 r_xyhbond_nbd_refined 0.115 r_chiral_restr 0.075 r_bond_refined_d 0.007 r_gen_planes_refined 0.003
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1521 Nucleic Acid Atoms Solvent Atoms 151 Heterogen Atoms 14
Software Software Software Name Purpose REFMAC refinement PDB_EXTRACT data extraction