2R9H

Crystal Structure of Q207C Mutant of CLC-ec1 in complex with Fab


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1sitting drop9.5295Vapor diffusion: 3 uL of protein complex, 7 mg/ml, in 50 mM NaKTartrate, 5 mM Tris, 12.5 mM NaCl, 18.5% w/v PEG300, 25 mM glycine against 300 uL of 25 mM NaCl, 37% w/v PEG300, 50 mM glycine, pH 9.5, sitting drop, temperature 295K
Crystal Properties
Matthews coefficientSolvent content
3.968.5

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 233.099α = 90
b = 98.358β = 131.77
c = 171.922γ = 90
Symmetry
Space GroupC 1 2 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-rayCCDADSC QUANTUM 315MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONNSLS BEAMLINE X29A0.9204NSLSX29A

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
13.15099.20.0814.46.752974
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
13.13.2196.70.484.85084

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUT3.15052493263899.270.2620.2610.28RANDOM105.226
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-3.29-0.83.2-0.98
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg33.177
r_dihedral_angle_3_deg15.824
r_dihedral_angle_4_deg14.403
r_dihedral_angle_1_deg4.658
r_angle_refined_deg0.987
r_nbtor_refined0.301
r_nbd_refined0.192
r_xyhbond_nbd_refined0.118
r_symmetry_vdw_refined0.112
r_chiral_restr0.063
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg33.177
r_dihedral_angle_3_deg15.824
r_dihedral_angle_4_deg14.403
r_dihedral_angle_1_deg4.658
r_angle_refined_deg0.987
r_nbtor_refined0.301
r_nbd_refined0.192
r_xyhbond_nbd_refined0.118
r_symmetry_vdw_refined0.112
r_chiral_restr0.063
r_symmetry_hbond_refined0.034
r_bond_refined_d0.007
r_gen_planes_refined0.002
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms13217
Nucleic Acid Atoms
Solvent Atoms
Heterogen Atoms4

Software

Software
Software NamePurpose
DENZOdata reduction
SCALEPACKdata scaling
PHASERphasing
REFMACrefinement
PDB_EXTRACTdata extraction
HKL-2000data collection
HKL-2000data reduction