☰ Navigation Tabs
Crystal structure of a serine recombinase- DNA regulatory complex
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 7.5 292 drops containing 25 mM TRIS and 100 mM ammonium sulfate were mixed 1:1 with the sin-dna complex solution, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 292K
Crystal Properties Matthews coefficient Solvent content 5.898773 79.148209
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 132.5 α = 90 b = 132.5 β = 90 c = 315.1 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 315 2006-02-08 M MAD 2 1 x-ray 100 CCD ADSC QUANTUM 315 2006-02-08 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 19-ID 0.91977, 0.91988 APS 19-ID 2 SYNCHROTRON APS BEAMLINE 19-ID 1.77 APS 19-ID
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1,2 3.21 50 96.9 0.136 12.44 7.8 56885 55122
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 3.21 3.34 95.6 2.87 7.5 5436
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MAD THROUGHOUT 3.2 50 51441 48157 2407 93.6 0.267 0.2457 0.291 0.2558 random 80.563
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -13.197 -11.547 -13.705 26.902
RMS Deviations Key Refinement Restraint Deviation c_angle_deg 1.353 c_bond_d 0.011
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 6160 Nucleic Acid Atoms 2530 Solvent Atoms Heterogen Atoms 10
Software Software Software Name Purpose CNS refinement PDB_EXTRACT data extraction ADSC data collection HKL-3000 data reduction HKL-3000 data scaling SOLVE phasing