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Crystal structure of uncharacterized protein Atu1531
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 4.6 289 0.1M Sodium acetate, 1.5M Ammonium sulfate, pH 4.6, VAPOR DIFFUSION, HANGING DROP, temperature 289K
Crystal Properties Matthews coefficient Solvent content 2.92 57.9
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 95.852 α = 90 b = 95.852 β = 90 c = 76.618 γ = 120
Symmetry Space Group P 31 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 315 2005-08-25 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 19-ID 0.9795224 APS 19-ID
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.35 50 93.9 0.085 32.688 8.4 17280 16220 -3 48.87
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.35 2.37 70.3 0.488 22.35 3.8
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD THROUGHOUT 2.35 41.52 15385 15385 810 93.83 0.21046 0.20878 0.2076 0.2426 0.2437 RANDOM 62.249
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -1.88 -0.94 -1.88 2.82
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.145 r_dihedral_angle_3_deg 18.139 r_dihedral_angle_4_deg 17.723 r_dihedral_angle_1_deg 6.114 r_scangle_it 2.312 r_scbond_it 1.517 r_angle_refined_deg 1.344 r_mcangle_it 1.159 r_mcbond_it 0.853 r_symmetry_vdw_refined 0.306
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.145 r_dihedral_angle_3_deg 18.139 r_dihedral_angle_4_deg 17.723 r_dihedral_angle_1_deg 6.114 r_scangle_it 2.312 r_scbond_it 1.517 r_angle_refined_deg 1.344 r_mcangle_it 1.159 r_mcbond_it 0.853 r_symmetry_vdw_refined 0.306 r_nbtor_refined 0.301 r_nbd_refined 0.209 r_symmetry_hbond_refined 0.139 r_xyhbond_nbd_refined 0.138 r_chiral_restr 0.09 r_bond_refined_d 0.01 r_gen_planes_refined 0.004 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_other r_nbtor_other r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2026 Nucleic Acid Atoms Solvent Atoms 66 Heterogen Atoms 8
Software Software Software Name Purpose REFMAC refinement SBC-Collect data collection HKL-2000 data reduction HKL-2000 data scaling HKL-3000 phasing