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Human septin 2 in complex with GDP
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION 6.5 291 PEG 3350, 0.2M Trilithium citrate, 0.1M Bis-Tris, pH 6.5, VAPOR DIFFUSION, temperature 291K
Crystal Properties Matthews coefficient Solvent content 2.51 51.07
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 164.536 α = 90 b = 52.295 β = 132.48 c = 110.944 γ = 90
Symmetry Space Group C 1 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 210 2007-05-05 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON CHESS BEAMLINE A1 0.97770 CHESS A1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.5 20 98.9 0.057 17.1 7.2 22998
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.5 2.59 95.4 0.435 6.5 2193
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD THROUGHOUT 2.6 20 21100 1036 97.24 0.237 0.234 0.2547 0.293 0.2955 thin shells 22.672
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.87 -2.21 0.94 -3.05
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 38.412 r_dihedral_angle_4_deg 17.289 r_dihedral_angle_3_deg 16.616 r_dihedral_angle_1_deg 6.062 r_mcangle_it 3.431 r_scangle_it 3.272 r_mcbond_it 2.435 r_scbond_it 2.324 r_angle_refined_deg 1.388 r_angle_other_deg 0.889
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 38.412 r_dihedral_angle_4_deg 17.289 r_dihedral_angle_3_deg 16.616 r_dihedral_angle_1_deg 6.062 r_mcangle_it 3.431 r_scangle_it 3.272 r_mcbond_it 2.435 r_scbond_it 2.324 r_angle_refined_deg 1.388 r_angle_other_deg 0.889 r_mcbond_other 0.516 r_symmetry_vdw_other 0.341 r_nbd_refined 0.225 r_nbd_other 0.196 r_symmetry_vdw_refined 0.188 r_nbtor_refined 0.187 r_symmetry_hbond_refined 0.179 r_xyhbond_nbd_refined 0.157 r_nbtor_other 0.087 r_chiral_restr 0.073 r_bond_refined_d 0.015 r_gen_planes_refined 0.004 r_bond_other_d 0.002 r_gen_planes_other 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 3515 Nucleic Acid Atoms Solvent Atoms Heterogen Atoms 60
Software Software Software Name Purpose DENZO data reduction SCALEPACK data scaling SHELX phasing RESOLVE phasing REFMAC refinement PDB_EXTRACT data extraction ADSC data collection