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Troglitazone Bound to Fatty Acid Binding Protein 4
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 hanging drop 4.5 298 1.6 M ammonium sulfate, 0.1 M sodium acetate, 0.05 M K/Na phosphate, pH 4.5, hanging drop, temperature 298K
Crystal Properties Matthews coefficient Solvent content 2.81 56.24
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 49.886 α = 90 b = 81.414 β = 90 c = 94.127 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 4 2006-03-28 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON NSLS BEAMLINE X26C 1.0 NSLS X26C
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2 30 17515
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.31 12 16232 863 98.38 0.233 0.231 0.2377 0.276 0.2797 RANDOM 28.481
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.14 -0.26 0.13
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_1_deg 7.385 r_scangle_it 2.317 r_angle_refined_deg 1.457 r_scbond_it 1.387 r_mcangle_it 0.903 r_angle_other_deg 0.786 r_mcbond_it 0.472 r_symmetry_hbond_refined 0.368 r_symmetry_vdw_other 0.252 r_nbd_other 0.241
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_1_deg 7.385 r_scangle_it 2.317 r_angle_refined_deg 1.457 r_scbond_it 1.387 r_mcangle_it 0.903 r_angle_other_deg 0.786 r_mcbond_it 0.472 r_symmetry_hbond_refined 0.368 r_symmetry_vdw_other 0.252 r_nbd_other 0.241 r_nbd_refined 0.225 r_xyhbond_nbd_refined 0.146 r_symmetry_vdw_refined 0.143 r_nbtor_other 0.112 r_chiral_restr 0.083 r_bond_refined_d 0.012 r_gen_planes_refined 0.004 r_bond_other_d 0.002 r_gen_planes_other 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2076 Nucleic Acid Atoms Solvent Atoms 108 Heterogen Atoms 77
Software Software Software Name Purpose REFMAC refinement PDB_EXTRACT data extraction ADSC data collection DENZO data reduction SCALEPACK data scaling PHASER phasing