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dipepdyl peptidase IV in complex with inhibitor PZF
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP VAPOR DIFFUSION, HANGING DROP
Crystal Properties Matthews coefficient Solvent content 2.75 55.21
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 65.47 α = 90 b = 68.796 β = 90 c = 422.611 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 210 2005-06-29 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 17-ID 1.0 APS 17-ID
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.2 100 85.5 0.099 0.099 19.25 3.75 99926 85437 2.3
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.2 2.28 89 0.492 0.492 2.33 3.1 8748
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION FOURIER SYNTHESIS THROUGHOUT 2.2 41.9 80198 4234 85.72 0.19428 0.19122 0.2002 0.25299 0.2549 RANDOM 53.309
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -4.9 7.59 -2.69
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 33.88 r_dihedral_angle_4_deg 21.88 r_dihedral_angle_3_deg 18.381 r_dihedral_angle_1_deg 7.502 r_scangle_it 4.174 r_scbond_it 2.939 r_angle_refined_deg 2.147 r_mcangle_it 1.725 r_mcbond_it 1.432 r_angle_other_deg 1.027
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 33.88 r_dihedral_angle_4_deg 21.88 r_dihedral_angle_3_deg 18.381 r_dihedral_angle_1_deg 7.502 r_scangle_it 4.174 r_scbond_it 2.939 r_angle_refined_deg 2.147 r_mcangle_it 1.725 r_mcbond_it 1.432 r_angle_other_deg 1.027 r_mcbond_other 0.292 r_symmetry_vdw_other 0.288 r_nbd_other 0.237 r_nbd_refined 0.227 r_xyhbond_nbd_refined 0.219 r_nbtor_refined 0.204 r_symmetry_hbond_refined 0.185 r_symmetry_vdw_refined 0.175 r_chiral_restr 0.136 r_xyhbond_nbd_other 0.111 r_nbtor_other 0.11 r_bond_refined_d 0.026 r_gen_planes_refined 0.011 r_bond_other_d 0.004 r_gen_planes_other 0.002
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 11914 Nucleic Acid Atoms Solvent Atoms 331 Heterogen Atoms 287
Software Software Software Name Purpose REFMAC refinement ADSC data collection HKL-2000 data reduction HKL-2000 data scaling