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Crystal structure of IQN17
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 7.5 294 16% PEG4000, 1.5 M NaCl, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 294K
Crystal Properties Matthews coefficient Solvent content 2.05 40.13
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 24.986 α = 90 b = 39.846 β = 90 c = 135.396 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 4 X4A 2000-03-31 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON NSLS BEAMLINE X4A 0.979 NSLS X4A
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2 35 98.3 0.048 19.8 4.1 9644 37.4
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 2 2.07 94.4 0.209 911
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2 20 9139 463 0.23779 0.23414 0.2344 0.30954 0.3058 RANDOM 35.254
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 3.45 -0.79 -2.66
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 44.79 r_dihedral_angle_4_deg 20.933 r_dihedral_angle_3_deg 17.912 r_scbond_it 13.535 r_scangle_it 6.589 r_mcangle_it 6.326 r_dihedral_angle_1_deg 4.769 r_mcbond_it 2.185 r_angle_refined_deg 1.89 r_symmetry_hbond_refined 0.332
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 44.79 r_dihedral_angle_4_deg 20.933 r_dihedral_angle_3_deg 17.912 r_scbond_it 13.535 r_scangle_it 6.589 r_mcangle_it 6.326 r_dihedral_angle_1_deg 4.769 r_mcbond_it 2.185 r_angle_refined_deg 1.89 r_symmetry_hbond_refined 0.332 r_nbtor_refined 0.298 r_symmetry_vdw_refined 0.265 r_nbd_refined 0.229 r_xyhbond_nbd_refined 0.184 r_chiral_restr 0.133 r_bond_refined_d 0.023 r_gen_planes_refined 0.008 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_other r_nbtor_other r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1165 Nucleic Acid Atoms Solvent Atoms 84 Heterogen Atoms 13
Software Software Software Name Purpose REFMAC refinement ADSC data collection DENZO data reduction SCALEPACK data scaling PHASER phasing