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SalL double mutant Y70T/G131S with CLDA and L-MET
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 1RQP
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 7 277 28% PEG3350, 0.3M KCL, 2mM DTT, 0.1 M MOPSO, pH 7, VAPOR DIFFUSION, HANGING DROP, temperature 277K
Crystal Properties Matthews coefficient Solvent content 2.75 55.2
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 111.08 α = 90 b = 111.08 β = 90 c = 93.36 γ = 120
Symmetry Space Group P 63 2 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 2006-09-01 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ALS BEAMLINE 8.2.2 1 ALS 8.2.2
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.72 20 0.14 9.62 4.07 9501
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.72 2.88 0.37 3.9 4.14
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1RQP 2.72 20 8293 460 98.72 0.23935 0.2372 0.236 0.2829 0.2851 RANDOM 16.178
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.71 -0.36 -0.71 1.07
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 38.008 r_dihedral_angle_4_deg 16.293 r_dihedral_angle_3_deg 15.789 r_dihedral_angle_1_deg 5.571 r_angle_refined_deg 1.11 r_scangle_it 0.726 r_scbond_it 0.41 r_mcangle_it 0.385 r_nbtor_refined 0.302 r_mcbond_it 0.217
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 38.008 r_dihedral_angle_4_deg 16.293 r_dihedral_angle_3_deg 15.789 r_dihedral_angle_1_deg 5.571 r_angle_refined_deg 1.11 r_scangle_it 0.726 r_scbond_it 0.41 r_mcangle_it 0.385 r_nbtor_refined 0.302 r_mcbond_it 0.217 r_nbd_refined 0.173 r_symmetry_vdw_refined 0.162 r_symmetry_hbond_refined 0.124 r_xyhbond_nbd_refined 0.093 r_chiral_restr 0.073 r_bond_refined_d 0.006 r_gen_planes_refined 0.002 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_other r_nbtor_other r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1929 Nucleic Acid Atoms Solvent Atoms 48 Heterogen Atoms 28
Software Software Software Name Purpose REFMAC refinement XDS data reduction XDS data scaling PHASER phasing