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Design and synthesis of novel, conformationally restricted HMG-COA reductase inhibitors
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION 8.5 PEG 4000 21 % (w/v), TRIS (pH=8.5) 100 millimolar, Li2SO4 200 millimolar, DTT 50 millimolar , VAPOR DIFFUSION
Crystal Properties Matthews coefficient Solvent content 2.34 47.43
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 78.724 α = 90 b = 133.186 β = 92.63 c = 82.673 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MAR CCD 165 mm 2004-02-09 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 32-ID APS 32-ID
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2 30 95.6 0.053 16.71 3.5 112989
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 2 2.06 61.3 0.224 2.2 7207
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2 30 109547 3390 0.22499 0.22404 0.25587 RANDOM 28.142
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.81 -0.18 1.21 -0.41
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_1_deg 4.791 r_scangle_it 1.314 r_angle_refined_deg 0.96 r_scbond_it 0.742 r_angle_other_deg 0.706 r_mcangle_it 0.53 r_mcbond_it 0.274 r_nbd_other 0.196 r_symmetry_vdw_other 0.179 r_nbd_refined 0.159
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_1_deg 4.791 r_scangle_it 1.314 r_angle_refined_deg 0.96 r_scbond_it 0.742 r_angle_other_deg 0.706 r_mcangle_it 0.53 r_mcbond_it 0.274 r_nbd_other 0.196 r_symmetry_vdw_other 0.179 r_nbd_refined 0.159 r_xyhbond_nbd_refined 0.112 r_symmetry_vdw_refined 0.107 r_symmetry_hbond_refined 0.086 r_nbtor_other 0.078 r_chiral_restr 0.052 r_bond_refined_d 0.006 r_bond_other_d 0.002 r_gen_planes_refined 0.002 r_gen_planes_other 0.001 r_dihedral_angle_2_deg r_dihedral_angle_3_deg r_dihedral_angle_4_deg r_nbtor_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 12567 Nucleic Acid Atoms Solvent Atoms 1081 Heterogen Atoms 172
Software Software Software Name Purpose DENZO data reduction SCALEPACK data scaling REFMAC refinement PDB_EXTRACT data extraction