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Structural Genomics, the crystal structure of the CorC/HlyC transporter associated domain of a CBS domain protein from Chlorobium tepidum TLS
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 8.5 289 0.2M MgCl, 0.1M Tris-HCl, 25% PEG3350, pH 8.5, VAPOR DIFFUSION, SITTING DROP, temperature 289K
Crystal Properties Matthews coefficient Solvent content 2.62 52.97
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 108.243 α = 90 b = 108.493 β = 90 c = 106.37 γ = 90
Symmetry Space Group P 21 21 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 315 mirror 2007-02-21 M MAD
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 19-ID 0.97921, 0.97938 APS 19-ID
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.15 48.51 99.1 0.101 30.4 8.2 68297 68297 32.7
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.15 2.23 97 0.513 3.3 6.7 6599
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MAD THROUGHOUT 2.15 48.51 64784 64784 3453 98.95 0.1787 0.1787 0.17582 0.1756 0.23203 0.2295 RANDOM 38.446
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.13 0.02 -0.15
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 33.258 r_dihedral_angle_4_deg 21.094 r_dihedral_angle_3_deg 18.09 r_dihedral_angle_1_deg 7.311 r_scangle_it 3.538 r_scbond_it 2.309 r_angle_refined_deg 1.646 r_mcangle_it 1.457 r_mcbond_it 0.977 r_nbtor_refined 0.306
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 33.258 r_dihedral_angle_4_deg 21.094 r_dihedral_angle_3_deg 18.09 r_dihedral_angle_1_deg 7.311 r_scangle_it 3.538 r_scbond_it 2.309 r_angle_refined_deg 1.646 r_mcangle_it 1.457 r_mcbond_it 0.977 r_nbtor_refined 0.306 r_symmetry_vdw_refined 0.294 r_nbd_refined 0.217 r_symmetry_hbond_refined 0.176 r_xyhbond_nbd_refined 0.155 r_chiral_restr 0.125 r_metal_ion_refined 0.051 r_bond_refined_d 0.017 r_gen_planes_refined 0.006 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_other r_nbtor_other r_xyhbond_nbd_other r_metal_ion_other r_symmetry_vdw_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 8218 Nucleic Acid Atoms Solvent Atoms 559 Heterogen Atoms 92
Software Software Software Name Purpose REFMAC refinement HKL-3000 data collection HKL-3000 data reduction HKL-3000 data scaling MLPHARE phasing HKL-3000 phasing