2PL7

Orhorhombic crystal structure of hydrophobin HFBII in the presence of a detergent


X-RAY DIFFRACTION

Starting Model(s)

Initial Refinement Model(s)
TypeSourceAccession CodeDetails
experimental modelPDB 1R2MPDB ENTRY 1R2M

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, HANGING DROP6.912930.1 M lithium sulphate, 20% polyethylene glycol (MW2000), 0.1M Tris (pH 8.5), pH 6.91, VAPOR DIFFUSION, HANGING DROP, temperature 293K
Crystal Properties
Matthews coefficientSolvent content
1.9231.918

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 25.3α = 90
b = 57.1β = 90
c = 72.1γ = 90
Symmetry
Space GroupP 21 21 21

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDMARMOSAIC 225 mm CCD2006-10-03MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONEMBL/DESY, HAMBURG BEAMLINE X120.900EMBL/DESY, HAMBURGX12

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
112098.30.1018.823.4109088107245-38.243
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
11.296.90.2423.92.3544537

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodStarting modelResolution (High)Resolution (Low)Number Reflections (All)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTFREE RPDB ENTRY 1R2M120109088107245283298.30.17960.1515RANDOM10.2
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
Coordinate Error
Structure Solution MethodRefinement High ResolutionRefinement Low Resolution
89481073.52
RMS Deviations
KeyRefinement Restraint Deviation
s_non_zero_chiral_vol0.115
s_zero_chiral_vol0.086
s_approx_iso_adps0.084
s_anti_bump_dis_restr0.069
s_similar_adp_cmpnt0.05
s_angle_d0.034
s_from_restr_planes0.0338
s_bond_d0.014
s_rigid_bond_adp_cmpnt0.006
s_similar_dist
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms963
Nucleic Acid Atoms
Solvent Atoms149
Heterogen Atoms29

Software

Software
Software NamePurpose
XSCALEdata scaling
PHASERphasing
SHELXrefinement
PDB_EXTRACTdata extraction
MAR345dtbdata collection
XDSdata reduction
SHELXL-97refinement