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Full-length Replication protein A subunits RPA14 and RPA32
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 1QUQ PDB ENTRY 1QUQ
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 6.5 293 10% dioxane, 0.1 M MES pH 6.5, 39% saturated ammonium sulfate, VAPOR DIFFUSION, HANGING DROP, temperature 293K
Crystal Properties Matthews coefficient Solvent content 2.69 54.35
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 81.485 α = 90 b = 139.826 β = 90 c = 171.842 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 IMAGE PLATE MAR scanner 345 mm plate 1999-12-10 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SSRL BEAMLINE BL7-1 SSRL BL7-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2 50 95 0.055 10.9 3.5 170250 162767 1.7 1.7
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2 2.1 98.59 0.4 1.7 2.8
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT PDB ENTRY 1QUQ 2 30 124950 6579 99 0.23324 0.23208 0.2337 0.25487 0.2538 RANDOM 41.137
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.32 -0.78 1.11
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.421 r_dihedral_angle_3_deg 15.72 r_dihedral_angle_4_deg 14.476 r_dihedral_angle_1_deg 6.924 r_scangle_it 2.781 r_scbond_it 1.739 r_mcangle_it 1.608 r_angle_refined_deg 1.366 r_mcbond_it 0.95 r_nbtor_refined 0.305
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.421 r_dihedral_angle_3_deg 15.72 r_dihedral_angle_4_deg 14.476 r_dihedral_angle_1_deg 6.924 r_scangle_it 2.781 r_scbond_it 1.739 r_mcangle_it 1.608 r_angle_refined_deg 1.366 r_mcbond_it 0.95 r_nbtor_refined 0.305 r_nbd_refined 0.207 r_symmetry_vdw_refined 0.134 r_xyhbond_nbd_refined 0.115 r_symmetry_hbond_refined 0.101 r_chiral_restr 0.098 r_bond_refined_d 0.011 r_gen_planes_refined 0.004 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_other r_nbtor_other r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 7612 Nucleic Acid Atoms Solvent Atoms 244 Heterogen Atoms 24
Software Software Software Name Purpose REFMAC refinement HKL-2000 data collection HKL-2000 data reduction HKL-2000 data scaling PHASER phasing