2P6J

Full-sequence computational design and solution structure of a thermostable protein variant


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
1aliphatic 3D_13C-separated_NOESYUniform (random) labeling with 13C, 15N: U-13C, U-15N, 95% H2O, 5% D2O95% H2O/5% D2O50 mM sodium phosphate5.51 atm293
2aromatic 3D_13C-separated_NOESYUniform (random) labeling with 13C, 15N: U-13C, U-15N, 95% H2O, 5% D2O95% H2O/5% D2O50 mM sodium phosphate5.51 atm293
33D_15N-separated_NOESYUniform (random) labeling with 13C, 15N: U-13C, U-15N, 95% H2O, 5% D2O95% H2O/5% D2O50 mM sodium phosphate5.51 atm293
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1VarianINOVA600
NMR Refinement
MethodDetailsSoftware
simulated annealing, distance geometryThe structures are based on a total of 1321 restraints: 1245 are NOE-derived distance constraints, 57 are dihedral angle restraints and 19 distance restraints are from hydrogen bonds.VNMR
NMR Ensemble Information
Conformer Selection Criteriastructures with acceptable covalent geometry,structures with the least restraint violations
Conformers Calculated Total Number100
Conformers Submitted Total Number43
Representative Model1 (closest to the average)
Additional NMR Experimental Information
DetailsThe structure was determined using triple-resonance NMR spectroscopy. Hydrogen bond restraints were derived from protection factors measured by H/D exchange. Torsion angle restraints were derived from J-coupling data (HNHA experiment) and from TALOS predictions.
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1collectionVNMR6.1Cvarian
2processingNMRPipeDelaglio, F. et al.
3data analysisNMRView4.0Johnson, B.A. et al.
4refinementARIA1.2Nilges, M. et al.
5structure solutionARIA1.2Nilges, M. et al.