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Crystal Structure of StaL
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 4.6 295 0.1M NaAc pH4.6, 3.0M NaCl, VAPOR DIFFUSION, HANGING DROP, temperature 295K
Crystal Properties Matthews coefficient Solvent content 2.73 54.94
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 86.018 α = 90 b = 86.018 β = 90 c = 164.753 γ = 120
Symmetry Space Group P 61 2 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 4 mirrors 2005-06-09 M MAD 2 1 x-ray 100 CCD ADSC QUANTUM 315 mirrors 2005-08-08 M SINGLE WAVELENGTH 3 1 1,2 1
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON NSLS BEAMLINE X8C 0.9795, 0.9794, 0.9643 NSLS X8C 2 SYNCHROTRON NSLS BEAMLINE X25 1.0 NSLS X25
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1,2 2.58 50 99.9 0.055 20.7 29.7 12023
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1,2 2.58 2.67 100 0.471 22.3 1153
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MAD THROUGHOUT 2.58 74.54 11969 572 99.8 0.251 0.249 0.2624 0.279 0.3311 RANDOM 71.811
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.93 -0.47 -0.93 1.4
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.941 r_dihedral_angle_4_deg 19.538 r_dihedral_angle_3_deg 17.558 r_dihedral_angle_1_deg 7.289 r_scangle_it 2.399 r_scbond_it 1.496 r_angle_refined_deg 1.48 r_mcangle_it 1.074 r_mcbond_it 0.616 r_nbtor_refined 0.308
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.941 r_dihedral_angle_4_deg 19.538 r_dihedral_angle_3_deg 17.558 r_dihedral_angle_1_deg 7.289 r_scangle_it 2.399 r_scbond_it 1.496 r_angle_refined_deg 1.48 r_mcangle_it 1.074 r_mcbond_it 0.616 r_nbtor_refined 0.308 r_nbd_refined 0.237 r_symmetry_vdw_refined 0.211 r_xyhbond_nbd_refined 0.17 r_symmetry_hbond_refined 0.162 r_chiral_restr 0.106 r_bond_refined_d 0.014 r_gen_planes_refined 0.005
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1768 Nucleic Acid Atoms Solvent Atoms 13 Heterogen Atoms
Software Software Software Name Purpose DENZO data reduction SCALEPACK data scaling SOLVE phasing RESOLVE phasing REFMAC refinement PDB_EXTRACT data extraction