☰ Navigation Tabs
Ferredoxin-NADP+ reductase from Plasmodium falciparum
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 MICROBATCH 5.4 293 NH4 Acetate 0.2 M, PEG 4000 22 % , pH 5.4, Microbatch, temperature 293K
Crystal Properties Matthews coefficient Solvent content 2.71 54.69
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 138.038 α = 90 b = 138.038 β = 90 c = 147.362 γ = 120
Symmetry Space Group P 32 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 315 2006-04-23 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ESRF BEAMLINE ID23-1 ESRF ID23-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.4 90 99.5 0.081 10.3 3.3 63426 63426
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.4 2.53 99.7 0.489 2.9 3.3 9180
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.4 20 60440 60066 3191 99.38 0.19794 0.19794 0.19544 0.24569 0.2591 RANDOM 43.896
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.29 -0.14 -0.29 0.43
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 38.057 r_dihedral_angle_4_deg 22.945 r_dihedral_angle_3_deg 16.94 r_scangle_it 6.714 r_dihedral_angle_1_deg 6.379 r_scbond_it 4.594 r_mcangle_it 3.689 r_mcbond_it 2.067 r_angle_refined_deg 1.347 r_nbtor_refined 0.311
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 38.057 r_dihedral_angle_4_deg 22.945 r_dihedral_angle_3_deg 16.94 r_scangle_it 6.714 r_dihedral_angle_1_deg 6.379 r_scbond_it 4.594 r_mcangle_it 3.689 r_mcbond_it 2.067 r_angle_refined_deg 1.347 r_nbtor_refined 0.311 r_nbd_refined 0.197 r_symmetry_hbond_refined 0.182 r_symmetry_vdw_refined 0.171 r_xyhbond_nbd_refined 0.15 r_chiral_restr 0.088 r_bond_refined_d 0.01 r_gen_planes_refined 0.004 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_other r_nbtor_other r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 8720 Nucleic Acid Atoms Solvent Atoms 291 Heterogen Atoms 238
Software Software Software Name Purpose MOLREP phasing REFMAC refinement MOSFLM data reduction CCP4 data scaling