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CRYSTAL STRUCTURE OF A PROTEIN WITH UNKNOWN FUNCTION FROM DUF3598 FAMILY (NPUN_R4044) FROM NOSTOC PUNCTIFORME PCC 73102 AT 1.75 A RESOLUTION
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP, NANODROP 6.3 277 0.2M NH4Cl, 20.0% PEG-3350, No Buffer pH 6.3, VAPOR DIFFUSION, SITTING DROP, NANODROP, temperature 277K
Crystal Properties Matthews coefficient Solvent content 2.39 48.55
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 61.21 α = 90 b = 71.88 β = 90 c = 132.61 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MARMOSAIC 325 mm CCD Flat mirror (vertical focusing) 2006-11-20 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SSRL BEAMLINE BL11-1 SSRL BL11-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.75 29.148 93.7 0.083 9.71 56361 24.116
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.75 1.81 70.4 0.462 1.6
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD THROUGHOUT 1.75 29.148 56308 2834 93.94 0.168 0.166 0.1743 0.208 0.215 RANDOM 21.992
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 2.08 -1.18 -0.9
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 34.783 r_dihedral_angle_4_deg 18.369 r_dihedral_angle_3_deg 12.507 r_dihedral_angle_1_deg 6.706 r_scangle_it 4.174 r_scbond_it 2.645 r_angle_refined_deg 1.641 r_mcangle_it 1.636 r_mcbond_it 1.059 r_angle_other_deg 0.828
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 34.783 r_dihedral_angle_4_deg 18.369 r_dihedral_angle_3_deg 12.507 r_dihedral_angle_1_deg 6.706 r_scangle_it 4.174 r_scbond_it 2.645 r_angle_refined_deg 1.641 r_mcangle_it 1.636 r_mcbond_it 1.059 r_angle_other_deg 0.828 r_symmetry_vdw_refined 0.276 r_mcbond_other 0.267 r_symmetry_vdw_other 0.247 r_nbd_refined 0.222 r_nbd_other 0.204 r_xyhbond_nbd_refined 0.182 r_nbtor_refined 0.176 r_symmetry_hbond_refined 0.158 r_chiral_restr 0.102 r_nbtor_other 0.084 r_bond_refined_d 0.016 r_gen_planes_refined 0.007 r_bond_other_d 0.002 r_gen_planes_other 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4225 Nucleic Acid Atoms Solvent Atoms 506 Heterogen Atoms 92
Software Software Software Name Purpose MolProbity model building REFMAC refinement XSCALE data scaling PDB_EXTRACT data extraction XDS data reduction SHARP phasing SOLVE phasing