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Nuclear movement protein from E. cuniculi GB-M1
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 7.5 298 25% PEG3350, 0.2M CaCl2, pH 7.5, VAPOR DIFFUSION, SITTING DROP, temperature 298K
Crystal Properties Matthews coefficient Solvent content 1.56 21.21
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 30.98 α = 90 b = 44.171 β = 90.08 c = 67.721 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 150 CCD SBC-2 2006-10-26 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 19-ID 0.9790156 APS 19-ID
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.66 50 91.8 20035 2 2
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.66 1.72 56.6 0.119 1.8 5.8 1224
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD THROUGHOUT 1.66 67.73 20034 18982 1034 91.74 0.2148 0.21686 0.21476 0.2212 0.25645 0.2669 RANDOM 30.565
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 2.29 -0.25 -1.63 -0.66
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 41.042 r_dihedral_angle_4_deg 20.47 r_dihedral_angle_3_deg 13.002 r_dihedral_angle_1_deg 5.509 r_scangle_it 4.195 r_scbond_it 2.578 r_mcangle_it 1.79 r_angle_refined_deg 1.307 r_mcbond_it 1.09 r_nbtor_refined 0.309
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 41.042 r_dihedral_angle_4_deg 20.47 r_dihedral_angle_3_deg 13.002 r_dihedral_angle_1_deg 5.509 r_scangle_it 4.195 r_scbond_it 2.578 r_mcangle_it 1.79 r_angle_refined_deg 1.307 r_mcbond_it 1.09 r_nbtor_refined 0.309 r_nbd_refined 0.227 r_symmetry_vdw_refined 0.153 r_symmetry_hbond_refined 0.135 r_xyhbond_nbd_refined 0.132 r_chiral_restr 0.095 r_bond_refined_d 0.011 r_gen_planes_refined 0.004 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_other r_nbtor_other r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1324 Nucleic Acid Atoms Solvent Atoms 184 Heterogen Atoms 16
Software Software Software Name Purpose REFMAC refinement SBC-Collect data collection HKL-3000 data reduction HKL-3000 data scaling HKL-3000 phasing SHELXE model building SOLVE phasing RESOLVE phasing ARP/wARP model building