2O12

Mycobacterium tuberculosis Chorismate synthase in complex with FMN


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, SITTING DROP4.52914.8 M NH4-Acetate, 0.1 M Na-Acetate, pH 4.5, VAPOR DIFFUSION, SITTING DROP, temperature 291K
Crystal Properties
Matthews coefficientSolvent content
4.7774.24

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 133.445α = 90
b = 133.445β = 90
c = 158.619γ = 120
Symmetry
Space GroupP 64 2 2

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDMAR CCD 165 mmAu-coated planar; toroidal mirrors2005-11-03MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONMPG/DESY, HAMBURG BEAMLINE BW61.05MPG/DESY, HAMBURGBW6

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.722099.90.08620.6788402882732.325.9
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
11.721.7499.90.9322.473488

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (All)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONFOURIER SYNTHESISTHROUGHOUT1.7219.748391383603441599.630.16570.16450.18783RANDOM23.079
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
0.120.060.12-0.18
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg31.411
r_dihedral_angle_4_deg19.778
r_dihedral_angle_3_deg12.56
r_scangle_it8.393
r_scbond_it6.02
r_dihedral_angle_1_deg5.306
r_mcangle_it4.433
r_mcbond_it3.082
r_angle_refined_deg1.317
r_mcbond_other0.919
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg31.411
r_dihedral_angle_4_deg19.778
r_dihedral_angle_3_deg12.56
r_scangle_it8.393
r_scbond_it6.02
r_dihedral_angle_1_deg5.306
r_mcangle_it4.433
r_mcbond_it3.082
r_angle_refined_deg1.317
r_mcbond_other0.919
r_angle_other_deg0.884
r_symmetry_vdw_other0.244
r_nbd_refined0.217
r_nbd_other0.19
r_nbtor_refined0.17
r_xyhbond_nbd_refined0.144
r_symmetry_hbond_refined0.139
r_symmetry_vdw_refined0.12
r_chiral_restr0.081
r_nbtor_other0.081
r_bond_refined_d0.011
r_gen_planes_refined0.005
r_xyhbond_nbd_other0.004
r_bond_other_d0.001
r_gen_planes_other0.001
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms2829
Nucleic Acid Atoms
Solvent Atoms511
Heterogen Atoms49

Software

Software
Software NamePurpose
REFMACrefinement
MAR345data collection
DENZOdata reduction
SCALEPACKdata scaling