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The structure of uncharacterized protein TM1266 from Thermotoga maritima.
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 4.5 293 1 M ammonium dihydrogen phosphate, 0.1M sodium acetate, pH 4.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K
Crystal Properties Matthews coefficient Solvent content 1.96 37.37
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 70.245 α = 90 b = 81.448 β = 90 c = 108.877 γ = 90
Symmetry Space Group C 2 2 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD CUSTOM-MADE 2005-04-10 M MAD
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 19-BM 0.97924, 0.97938 APS 19-BM
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.95 33.4 99.1 7 4.7 22828 22928 -3 37.3
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.95 2.001 98.51 4.6
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MAD THROUGHOUT 1.95 33.43 21766 21766 1162 99.13 0.21052 0.21052 0.20778 0.2071 0.25943 0.2579 RANDOM 37.317
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.06 -0.42 0.48
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 32.746 r_dihedral_angle_4_deg 19.553 r_dihedral_angle_3_deg 15.725 r_dihedral_angle_1_deg 6.031 r_scangle_it 3.576 r_scbond_it 2.366 r_mcangle_it 1.491 r_angle_refined_deg 1.467 r_mcbond_it 1.069 r_symmetry_vdw_refined 0.385
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 32.746 r_dihedral_angle_4_deg 19.553 r_dihedral_angle_3_deg 15.725 r_dihedral_angle_1_deg 6.031 r_scangle_it 3.576 r_scbond_it 2.366 r_mcangle_it 1.491 r_angle_refined_deg 1.467 r_mcbond_it 1.069 r_symmetry_vdw_refined 0.385 r_symmetry_hbond_refined 0.314 r_nbtor_refined 0.311 r_nbd_refined 0.217 r_xyhbond_nbd_refined 0.172 r_chiral_restr 0.108 r_bond_refined_d 0.013 r_gen_planes_refined 0.005
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2602 Nucleic Acid Atoms Solvent Atoms 274 Heterogen Atoms 26
Software Software Software Name Purpose REFMAC refinement SBC-Collect data collection HKL-2000 data reduction HKL-2000 data scaling HKL-3000 phasing SHELXD phasing SHELXE model building MLPHARE phasing DM phasing SOLVE phasing RESOLVE phasing ARP/wARP model building CCP4 phasing O model building Coot model building