X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, HANGING DROP6.529810%-15% PEG 6000/8000, 0.2-0.5 M calcium acetate, 0.1 M cacodylic acid, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 298K
Crystal Properties
Matthews coefficientSolvent content
2.4750.22

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 89.005α = 90
b = 98.33β = 90
c = 99.672γ = 90
Symmetry
Space GroupP 21 21 21

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDADSC QUANTUM 42004-08-31MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONNSLS BEAMLINE X26CNSLSX26C

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
12.55096.2293422822122

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (All)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (All)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUT2.5502934228221152596.180.2440.2440.2420.283RANDOM42.36
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
1.26-1.540.28
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg38.173
r_dihedral_angle_4_deg22.414
r_dihedral_angle_3_deg21.144
r_dihedral_angle_1_deg5.902
r_scangle_it2.763
r_scbond_it1.798
r_angle_refined_deg1.683
r_mcangle_it1.354
r_mcbond_it1.222
r_angle_other_deg0.887
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg38.173
r_dihedral_angle_4_deg22.414
r_dihedral_angle_3_deg21.144
r_dihedral_angle_1_deg5.902
r_scangle_it2.763
r_scbond_it1.798
r_angle_refined_deg1.683
r_mcangle_it1.354
r_mcbond_it1.222
r_angle_other_deg0.887
r_symmetry_vdw_other0.238
r_nbd_refined0.226
r_symmetry_hbond_refined0.217
r_nbd_other0.211
r_nbtor_refined0.181
r_mcbond_other0.154
r_xyhbond_nbd_refined0.133
r_symmetry_vdw_refined0.133
r_nbtor_other0.093
r_chiral_restr0.087
r_bond_refined_d0.016
r_gen_planes_refined0.005
r_bond_other_d0.002
r_gen_planes_other0.001
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms6080
Nucleic Acid Atoms
Solvent Atoms
Heterogen Atoms

Software

Software
Software NamePurpose
REFMACrefinement
PDB_EXTRACTdata extraction