☰ Navigation Tabs
Solution Structures of a DNA Dodecamer Duplex with a Cisplatin 1,2-d(GG) Intrastrand Cross-Link
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D NOESY 1.8 mM DNA, 100 mM NaCl, 5 mM phosphate buffer, pH 7.0 100% D2O 100mM NaCl, 5mM Napi 7.0 1 atm 298 2 2D TOCSY 1.8 mM DNA, 100 mM NaCl, 5 mM phosphate buffer, pH 7.0 100% D2O 100mM NaCl, 5mM Napi 7.0 1 atm 298 3 DQF-COSY 1.8 mM DNA, 100 mM NaCl, 5 mM phosphate buffer, pH 7.0 100% D2O 100mM NaCl, 5mM Napi 7.0 1 atm 298 4 2D NOESY 1.8 mM DNA, 100 mM NaCl, 5 mM phosphate buffer, pH 7.0, 95% H2O, 5% D2O 95% H2O/5% D2O 100mM NaCl, 5mM Napi 7.0 1 atm 298 5 2D 1H 31P HETCOR 1.8 mM DNA, 100 mM NaCl, 5 mM phosphate buffer, pH 7.0 100% D2O 100mM NaCl, 5mM Napi 7.0 1 atm 298
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Varian INOVA 600 2 Varian INOVA 800
NMR Refinement Method Details Software simulated annealing CNS
NMR Ensemble Information Conformer Selection Criteria structures with the lowest energy Conformers Calculated Total Number 1 Conformers Submitted Total Number 1 Representative Model 1 (minimized average structure)
Additional NMR Experimental Information Details This structure was determined using standard 2D homonuclear techniques
Computation: NMR Software # Classification Version Software Name Author 1 structure solution CNS 1.1 Brunger 2 refinement CNS 1.1 Brunger