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The solution NMR structure of the C-terminal effector domain of BfmR from Acinetobacter baumannii
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-15N HSQC 1 mM [U-100% 13C; U-100% 15N] BfmrC, 0.025 M Tris-HCl, 0.05 M KCl 90% H2O/10% D2O 0.05 6.5 1 atm 273 2 3D HNCO 1 mM [U-100% 13C; U-100% 15N] BfmrC, 0.025 M Tris-HCl, 0.05 M KCl 90% H2O/10% D2O 0.05 6.5 1 atm 273 3 3D HNCACB 1 mM [U-100% 13C; U-100% 15N] BfmrC, 0.025 M Tris-HCl, 0.05 M KCl 90% H2O/10% D2O 0.05 6.5 1 atm 273 4 3D C(CO)NH 1 mM [U-100% 13C; U-100% 15N] BfmrC, 0.025 M Tris-HCl, 0.05 M KCl 90% H2O/10% D2O 0.05 6.5 1 atm 273 5 3D CBCA(CO)NH 1 mM [U-100% 13C; U-100% 15N] BfmrC, 0.025 M Tris-HCl, 0.05 M KCl 90% H2O/10% D2O 0.05 6.5 1 atm 273 6 3D HCCH-TOCSY 1 mM [U-100% 13C] BfmrC, 0.025 M Tris-HCl, 0.05 M KCl 100% D2O 0.05 6.5 1 atm 273 7 3D H(CCO)NH 1 mM [U-100% 13C; U-100% 15N] BfmrC, 0.025 M Tris-HCl, 0.05 M KCl 90% H2O/10% D2O 0.05 6.5 1 atm 273 8 3D HBHA(CO)NH 1 mM [U-100% 13C; U-100% 15N] BfmrC, 0.025 M Tris-HCl, 0.05 M KCl 90% H2O/10% D2O 0.05 6.5 1 atm 273 9 3D 1H-13C NOESY aliphatic 1 mM [U-100% 13C] BfmrC, 0.025 M Tris-HCl, 0.05 M KCl 100% D2O 0.05 6.5 1 atm 273 10 3D 1H-13C NOESY aromatic 1 mM [U-100% 13C] BfmrC, 0.025 M Tris-HCl, 0.05 M KCl 100% D2O 0.05 6.5 1 atm 273 11 3D 1H-15N NOESY 1 mM [U-100% 13C; U-100% 15N] BfmrC, 0.025 M Tris-HCl, 0.05 M KCl 90% H2O/10% D2O 0.05 6.5 1 atm 273
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE 700 2 Varian INOVA 600
NMR Refinement Method Details Software simulated annealing NMRPipe
NMR Ensemble Information Conformer Selection Criteria structures with the lowest energy Conformers Calculated Total Number 100 Conformers Submitted Total Number 10 Representative Model 1 (lowest energy)
Computation: NMR Software # Classification Version Software Name Author 1 data analysis NMRPipe Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax 2 chemical shift assignment Sparky Goddard 3 structure solution Sparky Goddard 4 chemical shift assignment Sparky Guntert, Mumenthaler and Wuthrich 5 structure solution Sparky Guntert, Mumenthaler and Wuthrich 6 chemical shift assignment Sparky Goddard 7 structure solution Sparky Goddard 8 chemical shift assignment Sparky Guntert, Mumenthaler and Wuthrich 9 structure solution Sparky Guntert, Mumenthaler and Wuthrich 10 refinement Amber 12.0 Case, Darden, Cheatham, III, Simmerling, Wang, Duke, Luo, and Kollman