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Structure of CssA4 (bottom stem) of CssA thermometer
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-1H NOESY 0.4-1.1 mM CssA4 (36mer), 0.4-1.1 mM 13C/15N-uniformly labeled CssA4 (36mer), 0.4-1.1 mM 13C/15N-AU labeled CssA4 (36mer), 0.4-1.1 mM partially deuterated CssA4 (36mer) 95% H2O/5% D2O 6.0 ambient 298 2 2D 1H-1H TOCSY 0.4-1.1 mM CssA4 (36mer), 0.4-1.1 mM 13C/15N-uniformly labeled CssA4 (36mer), 0.4-1.1 mM 13C/15N-AU labeled CssA4 (36mer), 0.4-1.1 mM partially deuterated CssA4 (36mer) 95% H2O/5% D2O 6.0 ambient 298 3 2D DQF-COSY 0.4-1.1 mM CssA4 (36mer), 0.4-1.1 mM 13C/15N-uniformly labeled CssA4 (36mer), 0.4-1.1 mM 13C/15N-AU labeled CssA4 (36mer), 0.4-1.1 mM partially deuterated CssA4 (36mer) 95% H2O/5% D2O 6.0 ambient 298 4 2D 1H-13C HSQC 0.4-1.1 mM CssA4 (36mer), 0.4-1.1 mM 13C/15N-uniformly labeled CssA4 (36mer), 0.4-1.1 mM 13C/15N-AU labeled CssA4 (36mer), 0.4-1.1 mM partially deuterated CssA4 (36mer) 95% H2O/5% D2O 6.0 ambient 298 5 2D 1H-15N HSQC 0.4-1.1 mM CssA4 (36mer), 0.4-1.1 mM 13C/15N-uniformly labeled CssA4 (36mer), 0.4-1.1 mM 13C/15N-AU labeled CssA4 (36mer), 0.4-1.1 mM partially deuterated CssA4 (36mer) 95% H2O/5% D2O 6.0 ambient 298 6 3D 1H-13C NOESY 0.4-1.1 mM CssA4 (36mer), 0.4-1.1 mM 13C/15N-uniformly labeled CssA4 (36mer), 0.4-1.1 mM 13C/15N-AU labeled CssA4 (36mer), 0.4-1.1 mM partially deuterated CssA4 (36mer) 95% H2O/5% D2O 6.0 ambient 298 7 3D HCCH-TOCSY 0.4-1.1 mM CssA4 (36mer), 0.4-1.1 mM 13C/15N-uniformly labeled CssA4 (36mer), 0.4-1.1 mM 13C/15N-AU labeled CssA4 (36mer), 0.4-1.1 mM partially deuterated CssA4 (36mer) 95% H2O/5% D2O 6.0 ambient 298 8 ARTSY 0.4-1.1 mM CssA4 (36mer), 0.4-1.1 mM 13C/15N-uniformly labeled CssA4 (36mer), 0.4-1.1 mM 13C/15N-AU labeled CssA4 (36mer), 0.4-1.1 mM partially deuterated CssA4 (36mer) 95% H2O/5% D2O 6.0 ambient 298 9 ARTSY 0.4-1.1 mM CssA4 (36mer), 0.4-1.1 mM 13C/15N-uniformly labeled CssA4 (36mer), 0.4-1.1 mM 13C/15N-AU labeled CssA4 (36mer), 0.4-1.1 mM partially deuterated CssA4 (36mer) 95% H2O/5% D2O 6.0 ambient 298
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE 800 2 Bruker AVANCE 600 3 Agilent INOVA 900
NMR Refinement Method Details Software torsion angle dynamics TopSpin
NMR Ensemble Information Conformer Selection Criteria structures with the least restraint violations Conformers Calculated Total Number 50 Conformers Submitted Total Number 10 Representative Model 1 (lowest energy)
Computation: NMR Software # Classification Version Software Name Author 1 collection TopSpin Bruker Biospin 2 processing TopSpin Bruker Biospin 3 processing NMRPipe Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax 4 data analysis NMRPipe Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax 5 chemical shift assignment Sparky Goddard 6 data analysis Sparky Goddard 7 peak picking Sparky Goddard 8 peak picking X-PLOR NIH Schwieters, Kuszewski, Tjandra and Clore 9 structure solution X-PLOR NIH Schwieters, Kuszewski, Tjandra and Clore 10 refinement X-PLOR NIH Schwieters, Kuszewski, Tjandra and Clore