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The 3D solution structure of discoidal high-density lipoprotein particles
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-15N HSQC 0.5-1.0 mM [U-99% 13C; U-99% 15N] H2O, 1 mM stereospecific Methyl-labeling H2O, 1 mM selective unlabeling H2O 90% H2O/10% D2O 100 7.4 ambient 316 2 3D HNCO 0.5-1.0 mM [U-99% 13C; U-99% 15N] H2O, 1 mM stereospecific Methyl-labeling H2O, 1 mM selective unlabeling H2O 90% H2O/10% D2O 100 7.4 ambient 316 3 3D HNCA 0.5-1.0 mM [U-99% 13C; U-99% 15N] H2O, 1 mM stereospecific Methyl-labeling H2O, 1 mM selective unlabeling H2O 90% H2O/10% D2O 100 7.4 ambient 316 4 3D HNCACB 0.5-1.0 mM [U-99% 13C; U-99% 15N] H2O, 1 mM stereospecific Methyl-labeling H2O, 1 mM selective unlabeling H2O 90% H2O/10% D2O 100 7.4 ambient 316 5 3D 1H-15N NOESY 0.5-1.0 mM [U-99% 13C; U-99% 15N] H2O, 1 mM stereospecific Methyl-labeling H2O, 1 mM selective unlabeling H2O 90% H2O/10% D2O 100 7.4 ambient 316 6 2D 1H-13C HSQC 0.5-1.0 mM [U-99% 13C; U-99% 15N] H2O, 1 mM stereospecific Methyl-labeling H2O, 1 mM selective unlabeling H2O 90% H2O/10% D2O 100 7.4 ambient 316
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE 900 2 Bruker AVANCE 700 3 Bruker AVANCE 600
NMR Refinement Method Details Software simulated annealing Sparky
NMR Ensemble Information Conformer Selection Criteria target function Conformers Calculated Total Number 100 Conformers Submitted Total Number 10 Representative Model 1 (lowest energy)
Computation: NMR Software # Classification Version Software Name Author 1 chemical shift assignment Sparky Goddard 2 structure solution CYANA 3.97 Guntert, Braun and Wuthrich 3 refinement CYANA 3.97 Guntert, Braun and Wuthrich