☰ Navigation Tabs
Solution NMR Structure of DE NOVO DESIGNED Ferredoxin Fold PROTEIN sfr3, Northeast Structural Genomics Consortium (NESG) Target OR358
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-15N HSQC 0.787 mM OR358.006 90% H2O/10% D2O 6.5 ambient 298 2 2D 1H-13C HSQC 0.787 mM OR358.006 90% H2O/10% D2O 6.5 ambient 298 3 3D HNCO 0.787 mM OR358.006 90% H2O/10% D2O 6.5 ambient 298 4 3D CBCA(CO)NH 0.787 mM OR358.006 90% H2O/10% D2O 6.5 ambient 298 5 3D HNCACB 0.787 mM OR358.006 90% H2O/10% D2O 6.5 ambient 298 6 3D 1H-13C arom NOESY 0.787 mM OR358.006 90% H2O/10% D2O 6.5 ambient 298 7 3D simutaneous 13C-aromatic,13C-aliphatic,15N edited 1H-1H NOESY 0.787 mM OR358.006 90% H2O/10% D2O 6.5 ambient 298 8 3D CCH-TOCSY 0.787 mM OR358.006 90% H2O/10% D2O 6.5 ambient 298
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE 800 2 Varian INOVA 600 3 Varian INOVA 600
NMR Refinement Method Details Software distance geometry, simulated annealing, molecular dynamics, null null, null CNS
NMR Ensemble Information Conformer Selection Criteria target function Conformers Calculated Total Number 100 Conformers Submitted Total Number 20 Representative Model 1 (lowest energy)
Computation: NMR Software # Classification Version Software Name Author 1 refinemen,structure solution,geometry optimization CNS Brunger, Adams, Clore, Gros, Nilges and Read 2 refinement,geometry optimization,structure solution CYANA 3.0 Guntert, Mumenthaler and Wuthrich 3 data analysis,refinement AutoStructure 2.1 Huang, Tejero, Powers and Montelione 4 data analysis,chemical shift assignment AutoAssign 2.1 Zimmerman, Moseley, Kulikowski and Montelione 5 processing NMRPipe Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax 6 data analysis,peak picking,chemical shift assignment XEASY Bartels et al. 7 collection TopSpin Bruker Biospin 8 collection VnmrJ Varian 9 data analysis Sparky Goddard 10 geometry optimization TALOS+ Shen, Cornilescu, Delaglio and Bax 11 geometry optimization PALES PALES (Zweckstetter, Bax) 12 geometry optimization REDCAT Valafar, Prestegard 13 structure validation PSVS Bhattacharya, Montelione 14 refinement CYANA Huang, Tejero, Powers and Montelione 15 refinement CNS Brunger, Adams, Clore, Gros, Nilges and Read