☰ Navigation Tabs
Structural features of a 3' splice site in influenza A: 39-nt hairpin
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-1H NOESY 1.1 mM RNA (39-MER) 95% H2O/5% D2O 101.12 6.0 ambient 293.15 2 2D 1H-1H NOESY 1.1 mM RNA (39-MER) 95% H2O/5% D2O 101.12 6.0 ambient 271.15 3 2D 1H-1H TOCSY 1.1 mM RNA (39-MER) 95% H2O/5% D2O 101.12 6.0 ambient 293.15
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Varian INOVA 600
NMR Refinement Method Details Software simulated annealing Amber
NMR Ensemble Information Conformer Selection Criteria all calculated structures submitted Conformers Calculated Total Number 20 Conformers Submitted Total Number 20 Representative Model 1 (lowest energy)
Computation: NMR Software # Classification Version Software Name Author 1 refinement Amber 11 Case, D.A. et al. 2 chemical shift assignment Sparky Goddard 3 peak picking Sparky Goddard 4 data analysis Sparky Goddard 5 processing NMRPipe Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax 6 collection VNMR Varian