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Structure determination of Stage V sporulation protein M (SpoVM)
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-15N HSQC 0.5-1 mM [U-100% 13C; U-100% 15N] SpoVM, 16 mM sodium phosphate, 80 mM sodium chloride 95% H2O/5% D2O 80 6.5 ambient 310 2 2D 1H-13C HSQC 0.5-1 mM [U-100% 13C; U-100% 15N] SpoVM, 16 mM sodium phosphate, 80 mM sodium chloride 95% H2O/5% D2O 80 6.5 ambient 310 3 3D HNCO 0.5-1 mM [U-100% 13C; U-100% 15N] SpoVM, 16 mM sodium phosphate, 80 mM sodium chloride 95% H2O/5% D2O 80 6.5 ambient 310 4 3D HNCA 0.5-1 mM [U-100% 13C; U-100% 15N] SpoVM, 16 mM sodium phosphate, 80 mM sodium chloride 95% H2O/5% D2O 80 6.5 ambient 310 5 3D HNCACB 0.5-1 mM [U-100% 13C; U-100% 15N] SpoVM, 16 mM sodium phosphate, 80 mM sodium chloride 95% H2O/5% D2O 80 6.5 ambient 310 6 3D HCCH-TOCSY 0.5-1 mM [U-100% 13C; U-100% 15N] SpoVM, 16 mM sodium phosphate, 80 mM sodium chloride 95% H2O/5% D2O 80 6.5 ambient 310 7 3D 1H-15N NOESY 0.5-1 mM [U-100% 13C; U-100% 15N] SpoVM, 16 mM sodium phosphate, 80 mM sodium chloride 95% H2O/5% D2O 80 6.5 ambient 310 8 3D 1H-13C NOESY 0.5-1 mM [U-100% 13C; U-100% 15N] SpoVM, 16 mM sodium phosphate, 80 mM sodium chloride 95% H2O/5% D2O 80 6.5 ambient 310
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE II 600 2 Bruker AVANCE III 850
NMR Refinement Method Details Software simulated annealing NMRView
NMR Ensemble Information Conformer Selection Criteria structures with the lowest energy Conformers Calculated Total Number 50 Conformers Submitted Total Number 10 Representative Model 1 (lowest energy)
Computation: NMR Software # Classification Version Software Name Author 1 data analysis NMRView Johnson, One Moon Scientific 2 processing NMRPipe Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax 3 refinement X-PLOR NIH Schwieters, Kuszewski, Tjandra and Clore 4 structure solution CYANA Guntert, Mumenthaler and Wuthrich