2MPF
Solution structure human HCN2 CNBD in the cAMP-unbound state
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 2D 1H-15N HSQC | 1 mM [U-15N] HCN2 CNBD, 20 mM potassium phosphate, 150 mM potassium chloride | 90% H2O/10% D2O | 7.0 | ambient | 298 | ||
2 | 2D 1H-13C HSQC | 1 mM [U-13C; U-15N] HCN2 CNBD, 20 mM potassium phosphate, 150 mM potassium chloride | 90% H2O/10% D2O | 7.0 | ambient | 298 | ||
3 | 3D CBCA(CO)NH | 1 mM [U-13C; U-15N] HCN2 CNBD, 20 mM potassium phosphate, 150 mM potassium chloride | 90% H2O/10% D2O | 7.0 | ambient | 298 | ||
4 | 3D HNCO | 1 mM [U-13C; U-15N] HCN2 CNBD, 20 mM potassium phosphate, 150 mM potassium chloride | 90% H2O/10% D2O | 7.0 | ambient | 298 | ||
5 | 3D HNCACB | 1 mM [U-13C; U-15N] HCN2 CNBD, 20 mM potassium phosphate, 150 mM potassium chloride | 90% H2O/10% D2O | 7.0 | ambient | 298 | ||
6 | 3D 1H-15N NOESY | 1 mM [U-15N] HCN2 CNBD, 20 mM potassium phosphate, 150 mM potassium chloride | 90% H2O/10% D2O | 7.0 | ambient | 298 | ||
7 | 3D 1H-13C NOESY | 1 mM [U-13C; U-15N] HCN2 CNBD, 20 mM potassium phosphate, 150 mM potassium chloride | 90% H2O/10% D2O | 7.0 | ambient | 298 | ||
8 | 3D HCCH-TOCSY | 1 mM [U-13C; U-15N] HCN2 CNBD, 20 mM potassium phosphate, 150 mM potassium chloride | 90% H2O/10% D2O | 7.0 | ambient | 298 | ||
9 | 2D 1H-1H NOESY | 1 mM HCN2 CNBD, 20 mM potassium phosphate, 150 mM potassium chloride | 90% H2O/10% D2O | 7.0 | ambient | 298 | ||
10 | 2D 1H-1H TOCSY | 1 mM HCN2 CNBD, 20 mM potassium phosphate, 150 mM potassium chloride | 90% H2O/10% D2O | 7.0 | ambient | 298 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | AVANCE | 600 |
2 | Bruker | AVANCE | 800 |
3 | Bruker | AVANCE | 900 |
NMR Refinement | ||
---|---|---|
Method | Details | Software |
torsion angle dynamics, molecular dynamics | TopSpin |
NMR Ensemble Information | |
---|---|
Conformer Selection Criteria | target function |
Conformers Calculated Total Number | 500 |
Conformers Submitted Total Number | 20 |
Representative Model | 1 (closest to the average) |
Computation: NMR Software | ||||
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# | Classification | Version | Software Name | Author |
1 | collection | TopSpin | 2.1 | Bruker Biospin |
2 | processing | TopSpin | 2.1 | Bruker Biospin |
3 | chemical shift assignment | CARA | 1.8 | Keller and Wuthrich |
4 | data analysis | CARA | 1.8 | Keller and Wuthrich |
5 | peak picking | CARA | 1.8 | Keller and Wuthrich |
6 | structure solution | CYANA | 2.1 | Guntert, Mumenthaler and Wuthrich |
7 | refinement | Amber | 12 | Case, Darden, Cheatham, III, Simmerling, Wang, Duke, Luo, ... and Kollman |
8 | structure validation | CING | Geerten Vuister, Jurgen F. Doreleijers and Alan Wilter Sousa da Silva | |
9 | structure validation | PSVS | Bhattacharya and Montelione | |
10 | structure solution | CANDID | Herrmann, Guntert and Wuthrich | |
11 | refinement | CYANA | Guntert, Mumenthaler and Wuthrich |