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MISTLETOE LECTIN I FROM VISCUM ALBUM
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 2AAI
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 4.5 pH 4.5
Crystal Properties Matthews coefficient Solvent content 4.94 75.08
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 107.648 α = 90 b = 107.648 β = 90 c = 311.278 γ = 120
Symmetry Space Group P 65 2 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 IMAGE PLATE MARRESEARCH 1998-05-15 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON MPG/DESY, HAMBURG BEAMLINE BW6 MPG/DESY, HAMBURG BW6
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.7 10 99.1 0.025 4.8 29232
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.7 10 99.1
Refinement Statistics Diffraction ID Structure Solution Method Starting model Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Work (Depositor) R-Free (Depositor) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT 2AAI 2.7 8 29232 29232 99.1 0.251 0.319
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
RMS Deviations Key Refinement Restraint Deviation p_special_tor 45.4 p_transverse_tor 30.3 p_staggered_tor 25.8 p_planar_tor 10.7 p_chiral_restr 0.172 p_planar_d 0.077 p_angle_d 0.066 p_bond_d 0.016 p_angle_deg p_hb_or_metal_coord
RMS Deviations Key Refinement Restraint Deviation p_special_tor 45.4 p_transverse_tor 30.3 p_staggered_tor 25.8 p_planar_tor 10.7 p_chiral_restr 0.172 p_planar_d 0.077 p_angle_d 0.066 p_bond_d 0.016 p_angle_deg p_hb_or_metal_coord p_mcbond_it p_mcangle_it p_scbond_it p_scangle_it p_plane_restr p_singtor_nbd p_multtor_nbd p_xhyhbond_nbd p_xyhbond_nbd p_orthonormal_tor
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 3706 Nucleic Acid Atoms Solvent Atoms 215 Heterogen Atoms 42
Software Software Software Name Purpose DENZO data reduction SCALEPACK data scaling AMoRE phasing REFMAC refinement