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Solution structure of YSCUCN in a micellar complex with SDS
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-15N HSQC 100 uM [U-99% 13C; U-99% 15N] protein-1, 30 mM sodium phosphate-2, 50 mM sodium chloride-3, 26 mM SDS-4 92% H2O/8% D2O 0.12 6.0 ambient 310 2 3D 1H-15N NOESY 100 uM [U-99% 13C; U-99% 15N] protein-1, 30 mM sodium phosphate-2, 50 mM sodium chloride-3, 26 mM SDS-4 92% H2O/8% D2O 0.12 6.0 ambient 310 3 3D 1H-15N TOCSY 100 uM [U-99% 13C; U-99% 15N] protein-1, 30 mM sodium phosphate-2, 50 mM sodium chloride-3, 26 mM SDS-4 92% H2O/8% D2O 0.12 6.0 ambient 310 4 3D HNCA 100 uM [U-99% 13C; U-99% 15N] protein-1, 30 mM sodium phosphate-2, 50 mM sodium chloride-3, 26 mM SDS-4 92% H2O/8% D2O 0.12 6.0 ambient 310 5 3D HN(CO)CA 100 uM [U-99% 13C; U-99% 15N] protein-1, 30 mM sodium phosphate-2, 50 mM sodium chloride-3, 26 mM SDS-4 92% H2O/8% D2O 0.12 6.0 ambient 310 6 3D HNHA 100 uM [U-99% 13C; U-99% 15N] protein-1, 30 mM sodium phosphate-2, 50 mM sodium chloride-3, 26 mM SDS-4 92% H2O/8% D2O 0.12 6.0 ambient 310
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE 600
NMR Refinement Method Details Software simulated annealing, torsion angle dynamics SIMULATED ANNEALING FROM EXTENDED STRUCTURE, MINIMIZATION IN TORSION ANGLE/CARTESIAN SPACE TopSpin
NMR Ensemble Information Conformer Selection Criteria structures with least restraint violations, followed by selection by lowest energy Conformers Calculated Total Number 100 Conformers Submitted Total Number 20 Representative Model 1 (lowest energy)
Computation: NMR Software # Classification Version Software Name Author 1 collection TopSpin Bruker Biospin 2 processing NMRPipe Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax 3 chemical shift assignment ANSIG Kraulis 4 structure solution X-PLOR NIH Schwieters, Kuszewski, Tjandra and Clore 5 refinement ProcheckNMR Laskowski and MacArthur 6 refinement X-PLOR NIH