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NMR structure of protein ZP_02069618.1 from Bacteroides uniformis ATCC 8492
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-15N HSQC 1.2 mM [U-99% 13C; U-99% 15N] protein, 0.03 % sodium azide, 50 mM sodium chloride, 20 mM sodium phosphate 95% H2O/5% D2O 0.0798 6 ambient 298 2 4D APSY-HACANH 1.2 mM [U-99% 13C; U-99% 15N] protein, 0.03 % sodium azide, 50 mM sodium chloride, 20 mM sodium phosphate 95% H2O/5% D2O 0.0798 6 ambient 298 3 5D APSY-CBCACONH 1.2 mM [U-99% 13C; U-99% 15N] protein, 0.03 % sodium azide, 50 mM sodium chloride, 20 mM sodium phosphate 95% H2O/5% D2O 0.0798 6 ambient 298 4 5D APSY-HACACONH 1.2 mM [U-99% 13C; U-99% 15N] protein, 0.03 % sodium azide, 50 mM sodium chloride, 20 mM sodium phosphate 95% H2O/5% D2O 0.0798 6 ambient 298 5 3D 1H-13C NOESY aliphatic 1.2 mM [U-99% 13C; U-99% 15N] protein, 0.03 % sodium azide, 50 mM sodium chloride, 20 mM sodium phosphate 95% H2O/5% D2O 0.0798 6 ambient 298 6 3D 1H-13C NOESY aromatic 1.2 mM [U-99% 13C; U-99% 15N] protein, 0.03 % sodium azide, 50 mM sodium chloride, 20 mM sodium phosphate 95% H2O/5% D2O 0.0798 6 ambient 298 7 3D 1H-15N NOESY 1.2 mM [U-99% 13C; U-99% 15N] protein, 0.03 % sodium azide, 50 mM sodium chloride, 20 mM sodium phosphate 95% H2O/5% D2O 0.0798 6 ambient 298
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE 800 2 Bruker AVANCE 600
NMR Refinement Method Details Software molecular dynamics CYANA
NMR Ensemble Information Conformer Selection Criteria target function Conformers Calculated Total Number 80 Conformers Submitted Total Number 20 Representative Model 1 (closest to the average)
Computation: NMR Software # Classification Version Software Name Author 1 structure solution CYANA Guntert P. 2 collection CYANA Guntert P. 3 processing CYANA Guntert P. 4 data analysis CYANA Guntert P. 5 structure solution TopSpin Bruker Biospin 6 collection TopSpin Bruker Biospin 7 processing TopSpin Bruker Biospin 8 data analysis TopSpin Bruker Biospin 9 chemical shift assignment CARA Keller and Wuthrich 10 data analysis CARA Keller and Wuthrich 11 chemical shift assignment j-UNIO Herrmann and Wuthrich 12 structure solution j-UNIO Herrmann and Wuthrich 13 peak picking GAPRO Hiller 14 geometry optimization OPALp Luginbuhl, Guntert, Billeter and Wuthrich 15 refinement OPALp Luginbuhl, Guntert, Billeter and Wuthrich