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NMR structure of the chicken CD3 epsilon delta/gamma heterodimer
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-15N HSQC 0.5 mM [U-98% 13C; U-98% 15N] protein-1 90% H2O/10% D2O 0.3 7.6 ambient 293 2 3D HN(COCA)CB 0.5 mM [U-100% 13C; U-100% 15N; U-80% 2H] protein-2 90% H2O/10% D2O 0.3 7.6 ambient 293 3 3D HNCACB 0.5 mM [U-100% 13C; U-100% 15N; U-80% 2H] protein-2 90% H2O/10% D2O 0.3 7.6 ambient 293 4 3D H(CCO)NH 0.5 mM [U-98% 13C; U-98% 15N] protein-1 90% H2O/10% D2O 0.3 7.6 ambient 293 5 3D HNCA 0.5 mM [U-98% 13C; U-98% 15N] protein-1 90% H2O/10% D2O 0.3 7.6 ambient 293 6 3D HNCO 0.5 mM [U-98% 13C; U-98% 15N] protein-1 90% H2O/10% D2O 0.3 7.6 ambient 293 7 3D HN(CO)CA 0.5 mM [U-100% 13C; U-100% 15N; U-80% 2H] protein-2 90% H2O/10% D2O 0.3 7.6 ambient 293 8 3D 1H-13C NOESY aliphatic 0.5 mM [U-98% 13C; U-98% 15N] protein-1 90% H2O/10% D2O 0.3 7.6 ambient 293 9 3D 1H-13C NOESY aromatic 0.5 mM [U-98% 13C; U-98% 15N] protein-1 90% H2O/10% D2O 0.3 7.6 ambient 293 10 3D 1H-15N NOESY 0.5 mM [U-98% 13C; U-98% 15N] protein-1 90% H2O/10% D2O 0.3 7.6 ambient 293
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE 600 2 Bruker AVANCE 800
NMR Refinement Method Details Software simulated annealing TopSpin
NMR Ensemble Information Conformer Selection Criteria structures with the least restraint violations Conformers Calculated Total Number 100 Conformers Submitted Total Number 10 Representative Model 1 (lowest energy)
Computation: NMR Software # Classification Version Software Name Author 1 collection TopSpin Bruker Biospin 2 processing TopSpin Bruker Biospin 3 data analysis XEASY Bartels et al. 4 structure solution CNS Brunger, Adams, Clore, Gros, Nilges and Read 5 refinement CNS