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Structure of Plasmodium Yoelii Merozoite Surface Protein 1 - C-terminal Domain, E28K mutant
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-15N HSQC 1 mM [U-99% 13C; U-99% 15N] MSP1_19-1, 25 mM potassium phosphate-2, 50 mM potassium chloride-3 90% H2O/10% D2O 75 6.5 ambient 298 2 3D HNCACB 1 mM [U-99% 13C; U-99% 15N] MSP1_19-1, 25 mM potassium phosphate-2, 50 mM potassium chloride-3 90% H2O/10% D2O 75 6.5 ambient 298 3 3D CBCA(CO)NH 1 mM [U-99% 13C; U-99% 15N] MSP1_19-1, 25 mM potassium phosphate-2, 50 mM potassium chloride-3 90% H2O/10% D2O 75 6.5 ambient 298 4 3D H(CCO)NH 1 mM [U-99% 13C; U-99% 15N] MSP1_19-1, 25 mM potassium phosphate-2, 50 mM potassium chloride-3 90% H2O/10% D2O 75 6.5 ambient 298 5 3D HCCH-TOCSY 1 mM [U-99% 13C; U-99% 15N] MSP1_19-1, 25 mM potassium phosphate-2, 50 mM potassium chloride-3 90% H2O/10% D2O 75 6.5 ambient 298 6 3D 1H-15N NOESY 1 mM [U-99% 13C; U-99% 15N] MSP1_19-1, 25 mM potassium phosphate-2, 50 mM potassium chloride-3 90% H2O/10% D2O 75 6.5 ambient 298 7 3D 1H-13C NOESY aliphatic 1 mM [U-99% 13C; U-99% 15N] MSP1_19-1, 25 mM potassium phosphate-2, 50 mM potassium chloride-3 90% H2O/10% D2O 75 6.5 ambient 298 8 3D 1H-13C NOESY aromatic 1 mM [U-99% 13C; U-99% 15N] MSP1_19-1, 25 mM potassium phosphate-2, 50 mM potassium chloride-3 90% H2O/10% D2O 75 6.5 ambient 298 9 2D 1H-13C HSQC 1 mM [U-99% 13C; U-99% 15N] MSP1_19-1, 25 mM potassium phosphate-2, 50 mM potassium chloride-3 90% H2O/10% D2O 75 6.5 ambient 298
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Varian INOVA 800 2 Bruker AVANCE 700 3 Bruker AVANCE 600 4 Varian INOVA 600
NMR Refinement Method Details Software simulated annealing Standard SA protocol using ARIA with final water refinement NMRPipe
NMR Ensemble Information Conformer Selection Criteria structures with the lowest energy Conformers Calculated Total Number 100 Conformers Submitted Total Number 20 Representative Model 1 (lowest energy)
Computation: NMR Software # Classification Version Software Name Author 1 processing NMRPipe 7.3 Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax 2 chemical shift assignment Sparky 3 Goddard 3 data analysis Sparky 3 Goddard 4 structure solution ARIA/CNS 2.2 Linge, O'Donoghue and Nilges 5 refinement ARIA/CNS