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Backbone 1H, 13C, and 15N Chemical Shift Assignments for murine norovirus NS1/2 D94E mutant
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-15N HSQC 50 mM sodium phosphate, 300 mM sodium chloride, 1 mM [U-100% 15N] protein, DSS 90% H2O/10% D2O 0.35 7.5 ambient 296 2 3D HNCO 50 mM sodium phosphate, 300 mM sodium chloride, 1 mM [U-100% 13C; U-100% 15N] protein, DSS 90% H2O/10% D2O 0.35 7.5 ambient 296 3 CBCANH 50 mM sodium phosphate, 300 mM sodium chloride, 1 mM [U-100% 13C; U-100% 15N] protein, DSS 90% H2O/10% D2O 0.35 7.5 ambient 296 4 CBCACONH 50 mM sodium phosphate, 300 mM sodium chloride, 1 mM [U-100% 13C; U-100% 15N] protein, DSS 90% H2O/10% D2O 0.35 7.5 ambient 296 5 HCCCONH 50 mM sodium phosphate, 300 mM sodium chloride, 1 mM [U-100% 13C; U-100% 15N] protein, DSS 90% H2O/10% D2O 0.35 7.5 ambient 296 6 CCCONH 50 mM sodium phosphate, 300 mM sodium chloride, 1 mM [U-100% 13C; U-100% 15N] protein, DSS 90% H2O/10% D2O 0.35 7.5 ambient 296 7 2D 1H-1H NOESY 50 mM sodium phosphate, 300 mM sodium chloride, 1 mM [U-100% 15N] protein, DSS 90% H2O/10% D2O 0.35 7.5 ambient 296 8 3D 1H-15N NOESY 50 mM sodium phosphate, 300 mM sodium chloride, 1 mM [U-100% 15N] protein, DSS 90% H2O/10% D2O 0.35 7.5 ambient 296 9 3D 1H-13C NOESY 50 mM sodium phosphate, 300 mM sodium chloride, 1 mM [U-100% 13C; U-100% 15N] protein, DSS 90% H2O/10% D2O 0.35 7.5 ambient 296
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE 600 2 Bruker AVANCE 800 3 Bruker AVANCE 900
NMR Refinement Method Details Software torsion angle dynamics TopSpin
NMR Ensemble Information Conformer Selection Criteria structures with the lowest energy Conformers Calculated Total Number 900 Conformers Submitted Total Number 20 Representative Model 1 (closest to the average)
Computation: NMR Software # Classification Version Software Name Author 1 collection TopSpin Bruker Biospin 2 processing NMRPipe Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax 3 geometry optimization TALOS Cornilescu, Delaglio and Bax 4 peak picking Sparky Goddard 5 structure solution CYANA Guntert, Mumenthaler and Wuthrich 6 refinement Amber Case, Darden, Cheatham, III, Simmerling, Wang, Duke, Luo, ... and Kollman 7 geometry optimization ProcheckNMR Laskowski and MacArthur 8 refinement CYANA Guntert, Mumenthaler and Wuthrich