2MAL
Solution structure of Lipid Transfer Protein from Lentil Lens Culinaris
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 2D DQF-COSY | 1.4 mM [U-100% 15N] Lc-LTP2 | 100% D2O | 0 | 5.6 | ambient | 303 | |
2 | 2D 1H-1H TOCSY | 1.4 mM [U-100% 15N] Lc-LTP2 | 100% D2O | 0 | 5.6 | ambient | 303 | |
3 | 2D 1H-1H NOESY | 1.4 mM [U-100% 15N] Lc-LTP2 | 100% D2O | 0 | 5.6 | ambient | 303 | |
4 | 2D 1H-15N HSQC | 1.4 mM [U-100% 15N] Lc-LTP2 | 95% H2O/5% D2O | 0 | 5.6 | ambient | 303 | |
5 | 3D 1H-15N NOESY | 1.4 mM [U-100% 15N] Lc-LTP2 | 95% H2O/5% D2O | 0 | 5.6 | ambient | 303 | |
6 | 3D 1H-15N TOCSY | 1.4 mM [U-100% 15N] Lc-LTP2 | 95% H2O/5% D2O | 0 | 5.6 | ambient | 303 | |
7 | 3D HNHA | 1.4 mM [U-100% 15N] Lc-LTP2 | 95% H2O/5% D2O | 0 | 5.6 | ambient | 303 | |
8 | 3D HNHB | 1.4 mM [U-100% 15N] Lc-LTP2 | 95% H2O/5% D2O | 0 | 5.6 | ambient | 303 | |
9 | 3D 1H-13C NOESY | 1.0-1.5 mM [U-100% 13C; U-100% 15N] Lc-LTP2 | 95% H2O/5% D2O | 0 | 5.6 | ambient | 303 | |
10 | 3D HCCH-TOCSY | 1.0-1.5 mM [U-100% 13C; U-100% 15N] Lc-LTP2 | 95% H2O/5% D2O | 0 | 5.6 | ambient | 303 | |
11 | 3D 1H-15N NOESY | 1.0-1.5 mM [U-100% 13C; U-100% 15N] Lc-LTP2 | 95% H2O/5% D2O | 0 | 5.6 | ambient | 303 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | Avance | 600 |
NMR Refinement | ||
---|---|---|
Method | Details | Software |
simulated annealing | XEASY |
NMR Ensemble Information | |
---|---|
Conformer Selection Criteria | target function |
Conformers Calculated Total Number | 200 |
Conformers Submitted Total Number | 20 |
Representative Model | 1 (fewest violations) |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
1 | peak picking | XEASY | Keller and Wuthrich | |
2 | chemical shift assignment | XEASY | Keller and Wuthrich | |
3 | data analysis | CYANA | Guntert, Mumenthaler and Wuthrich | |
4 | structure solution | CYANA | Guntert, Mumenthaler and Wuthrich | |
5 | refinement | TALOS | Cornilescu, Delaglio and Bax | |
6 | refinement | Procheck | Laskowski, MacArthur, Smith, Jones, Hutchinson, Morris, Moss and Tho | |
7 | refinement | CYANA |