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Solution structure of Hdm2 with engineered cyclotide
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-15N HSQC 0.2 mM MCo-PMI, 0.2 mM [U-99% 13C; U-99% 15N] Hdm2 90% H2O/10% D2O 0.133 6.5 ambient 300 2 2D 1H-15N HSQC 0.2 mM [U-99% 15N] Mo-PMI, 0.2 mM Hdm2 90% H2O/10% D2O 0.133 6.5 ambient 300 3 2D 1H-13C HSQC 0.2 mM [U-99% 15N] Mo-PMI, 0.2 mM Hdm2 90% H2O/10% D2O 0.133 6.5 ambient 300 4 3D 1H-15N NOESY 0.2 mM MCo-PMI, 0.2 mM [U-99% 13C; U-99% 15N] Hdm2 90% H2O/10% D2O 0.133 6.5 ambient 300 5 3D 1H-15N TOCSY 0.2 mM MCo-PMI, 0.2 mM [U-99% 13C; U-99% 15N] Hdm2 90% H2O/10% D2O 0.133 6.5 ambient 300 6 2D 1H-1H NOESY 0.2 mM MCo-PMI, 0.2 mM Hdm2 90% H2O/10% D2O 0.133 6.5 ambient 300 7 3D 1H-13C NOESY aliphatic 0.2 mM MCo-PMI, 0.2 mM [U-99% 13C; U-99% 15N] Hdm2 90% H2O/10% D2O 0.133 6.5 ambient 300 8 3D 1H-15N NOESY 0.2 mM [U-99% 15N] Mo-PMI, 0.2 mM Hdm2 90% H2O/10% D2O 0.133 6.5 ambient 300 9 3D 1H-15N TOCSY 0.2 mM [U-99% 15N] Mo-PMI, 0.2 mM Hdm2 90% H2O/10% D2O 0.133 6.5 ambient 300 10 3D HNCA 0.2 mM MCo-PMI, 0.2 mM [U-99% 13C; U-99% 15N] Hdm2 90% H2O/10% D2O 0.133 6.5 ambient 300 11 3D HN(CO)CA 0.2 mM MCo-PMI, 0.2 mM [U-99% 13C; U-99% 15N] Hdm2 90% H2O/10% D2O 0.133 6.5 ambient 300 12 3D HNCACB 0.2 mM MCo-PMI, 0.2 mM [U-99% 13C; U-99% 15N] Hdm2 90% H2O/10% D2O 0.133 6.5 ambient 300 13 2D 1H-1H TOCSY 0.2 mM MCo-PMI, 0.2 mM [U-99% 13C; U-99% 15N] Hdm2 90% H2O/10% D2O 0.133 6.5 ambient 300
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE 700
NMR Refinement Method Details Software DGSA-distance geometry simulated annealing CHRMM
NMR Ensemble Information Conformer Selection Criteria structures with the lowest energy Conformers Calculated Total Number 1000 Conformers Submitted Total Number 10 Representative Model 1 (lowest energy)
Computation: NMR Software # Classification Version Software Name Author 1 refinement CHRMM 36 Karplus, M. 2 structure solution CYANA 2.1 Guntert, Mumenthaler and Wuthrich