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Structure of the Type IVa Major Pilin from the Electrically Conductive Bacterial Nanowires of Geobacter sulfurreducens
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 3D HNCACB 1 mM [U-13C; U-15N] PilA, 200 mM [U-2H] DHPC 90% H2O/10% D2O 5 ambient 308 2 3D HNCO 1 mM [U-13C; U-15N] PilA, 200 mM [U-2H] DHPC 90% H2O/10% D2O 5 ambient 308 3 3D HNCA 1 mM [U-13C; U-15N] PilA, 200 mM [U-2H] DHPC 90% H2O/10% D2O 5 ambient 308 4 3D CBCA(CO)NH 1 mM [U-13C; U-15N] PilA, 200 mM [U-2H] DHPC 90% H2O/10% D2O 5 ambient 308 5 3D HNHA 1 mM [U-13C; U-15N] PilA, 200 mM [U-2H] DHPC 90% H2O/10% D2O 5 ambient 308 6 3D HCCH-TOCSY 1 mM [U-13C; U-15N] PilA, 200 mM [U-2H] DHPC 90% H2O/10% D2O 5 ambient 308 7 3D 1H-15N NOESY 1 mM [U-13C; U-15N] PilA, 200 mM [U-2H] DHPC 90% H2O/10% D2O 5 ambient 308 8 3D 1H-13C NOESY aliphatic 1 mM [U-13C; U-15N] PilA, 200 mM [U-2H] DHPC 90% H2O/10% D2O 5 ambient 308
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Varian VNMRs 800 2 Varian VNMRs 750
NMR Refinement Method Details Software torsion angle dynamics, simulated annealing VnmrJ
NMR Ensemble Information Conformer Selection Criteria structures with the least restraint violations Conformers Calculated Total Number 100 Conformers Submitted Total Number 18 Representative Model 1 (fewest violations)
Computation: NMR Software # Classification Version Software Name Author 1 collection VnmrJ 3.2 Varian 2 processing NMRPipe Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax 3 data analysis Sparky Goddard 4 data analysis CARA Keller and Wuthrich 5 structure solution CYANA Guntert, Mumenthaler and Wuthrich 6 refinement CNSSOLVE Brunger, Adams, Clore, Gros, Nilges and Read 7 refinement CYANA Guntert, Mumenthaler and Wuthrich