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The C-terminal Region of Disintegrin Modulate its 3D Conformation and Cooperate with RGD Loop in Regulating Integrins Recognitions
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-1H NOESY 2 mM 2mM Rhodostomin 48ARGDWN-67NGLYG mutant-1 90% H2O/10% D2O 0 6.0 ambient 300 2 2D 1H-1H TOCSY 2 mM 2mM Rhodostomin 48ARGDWN-67NGLYG mutant-1 90% H2O/10% D2O 0 6.0 ambient 300 3 2D 1H-1H NOESY 2 mM 2mM Rhodostomin 48ARGDWN-67NGLYG mutant-2 100% D2O 0 6.0 ambient 300 4 2D 1H-1H TOCSY 2 mM 2mM Rhodostomin 48ARGDWN-67NGLYG mutant-2 100% D2O 0 6.0 ambient 300 5 3D 1H-15N NOESY 2 mM [U-15N] 2mM Rhodostomin 48ARGDWN-67NGLYG mutant-3 90% H2O/10% D2O 0 6.0 ambient 300 6 3D 1H-15N TOCSY 2 mM [U-15N] 2mM Rhodostomin 48ARGDWN-67NGLYG mutant-3 90% H2O/10% D2O 0 6.0 ambient 300 7 3D HNHA 2 mM [U-15N] 2mM Rhodostomin 48ARGDWN-67NGLYG mutant-3 90% H2O/10% D2O 0 6.0 ambient 300 8 2D 1H-15N HSQC 2 mM [U-15N] 2mM Rhodostomin 48ARGDWN-67NGLYG mutant-3 90% H2O/10% D2O 0 6.0 ambient 300 9 2D 1H-15N HSQC 2 mM [U-15N] 2mM Rhodostomin 48ARGDWN-67NGLYG mutant-4 100% D2O 0 6.0 ambient 300
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE 600
NMR Refinement Method Details Software DGSA-distance geometry simulated annealing XwinNMR
NMR Ensemble Information Conformer Selection Criteria structures with the lowest energy Conformers Calculated Total Number 200 Conformers Submitted Total Number 20 Representative Model 1 (closest to the average)
Computation: NMR Software # Classification Version Software Name Author 1 collection XwinNMR 2.6 Bruker Biospin 2 data analysis AURELIA 3.1.7 Neidig, Geyer, Gorler, Antz, Saffrich, Beneicke, Kalbitzer 3 refinement X-PLOR 3.185 Brunger