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single G-bulge in a conserved regulatory region of the HEV genome
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-13C HSQC aliphatic 1 mM RNA-1 100% D2O 7 ambient 288 2 2D 1H-13C HSQC aromatic 1 mM RNA-1 100% D2O 7 ambient 288 3 2D 1H-1H TOCSY 1 mM RNA-1 100% D2O 7 ambient 288 4 2D DQF-COSY 1 mM RNA-1 100% D2O 7 ambient 288 5 2D 1H-1H NOESY 1 mM RNA-1 100% D2O 7 ambient 288 6 2D 1H-1H NOESY 1 mM RNA-2 90% H2O/10% D2O 7 278
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE 500 2 Bruker AVANCE 600
NMR Refinement Method Details Software torsion angle dynamics, simulated annealing X-PLOR NIH
NMR Ensemble Information Conformer Selection Criteria all calculated structures submitted Conformers Calculated Total Number 10 Conformers Submitted Total Number 10 Representative Model 1 (closest to the average)
Computation: NMR Software # Classification Version Software Name Author 1 structure solution X-PLOR NIH Schwieters, Kuszewski, Tjandra and Clore 2 refinement X-PLOR NIH Schwieters, Kuszewski, Tjandra and Clore