2M3U

Solution-state NMR structure of cataract-related human gamma(S)-crystallin point variant G18V


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-15N HSQC10 mM acetic acid, 2 mM 2,2',3,3'-D4 TSP, 0.05 % sodium azide, 1.50 mM [U-13C; U-15N] (gamma)S-G18V90% H2O/10% D2O4.5ambient295
22D 1H-13C HSQC aliphatic10 mM acetic acid, 2 mM 2,2',3,3'-D4 TSP, 0.05 % sodium azide, 1.50 mM [U-13C; U-15N] (gamma)S-G18V90% H2O/10% D2O4.5ambient295
32D 1H-13C HSQC aromatic10 mM acetic acid, 2 mM 2,2',3,3'-D4 TSP, 0.05 % sodium azide, 1.50 mM [U-13C; U-15N] (gamma)S-G18V90% H2O/10% D2O4.5ambient295
43D HNCACB10 mM acetic acid, 2 mM 2,2',3,3'-D4 TSP, 0.05 % sodium azide, 1.50 mM [U-13C; U-15N] (gamma)S-G18V90% H2O/10% D2O4.5ambient295
53D CBCA(CO)NH10 mM acetic acid, 2 mM 2,2',3,3'-D4 TSP, 0.05 % sodium azide, 1.50 mM [U-13C; U-15N] (gamma)S-G18V90% H2O/10% D2O4.5ambient295
63D HNCO10 mM acetic acid, 2 mM 2,2',3,3'-D4 TSP, 0.05 % sodium azide, 1.50 mM [U-13C; U-15N] (gamma)S-G18V90% H2O/10% D2O4.5ambient295
73D HCCH-TOCSY10 mM acetic acid, 2 mM 2,2',3,3'-D4 TSP, 0.05 % sodium azide, 1.50 mM [U-13C; U-15N] (gamma)S-G18V90% H2O/10% D2O4.5ambient295
83D HCCH-COSY10 mM acetic acid, 2 mM 2,2',3,3'-D4 TSP, 0.05 % sodium azide, 1.50 mM [U-13C; U-15N] (gamma)S-G18V90% H2O/10% D2O4.5ambient295
93D 1H-15N NOESY10 mM acetic acid, 2 mM 2,2',3,3'-D4 TSP, 0.05 % sodium azide, 1.50 mM [U-13C; U-15N] (gamma)S-G18V90% H2O/10% D2O4.5ambient295
103D 1H-13C NOESY aliphatic10 mM acetic acid, 2 mM 2,2',3,3'-D4 TSP, 0.05 % sodium azide, 1.50 mM [U-13C; U-15N] (gamma)S-G18V90% H2O/10% D2O4.5ambient295
113D 1H-13C NOESY aromatic10 mM acetic acid, 2 mM 2,2',3,3'-D4 TSP, 0.05 % sodium azide, 1.50 mM [U-13C; U-15N] (gamma)S-G18V90% H2O/10% D2O4.5ambient295
122D 1H-15N HSQC10 mM acetic acid, 2 mM 2,2',3,3'-D4 TSP, 0.05 % sodium azide, 7.5 % DIOTPC, 2.5 % DIOHPC, 2.0 mM [U-13C; U-15N] (gamma)S-G18V90% H2O/10% D2O4.5ambient303
133D HNHA10 mM acetic acid, 2 mM 2,2',3,3'-D4 TSP, 0.05 % sodium azide, 1.50 mM [U-13C; U-15N] (gamma)S-G18V90% H2O/10% D2O4.5ambient295
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1VarianINOVA800
NMR Refinement
MethodDetailsSoftware
simulated annealingVNMR
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number200
Conformers Submitted Total Number21
Representative Model1 (minimized average structure)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1collectionVNMRVarian
2processingNMRPipeDelaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
3chemical shift assignmentSparkyGoddard
4chemical shift assignmentCcpNmr AnalysisCCPN
5data analysisCcpNmr AnalysisCCPN
6peak pickingCcpNmr AnalysisCCPN
7refinementX-PLOR NIHSchwieters, Kuszewski, Tjandra and Clore
8structure solutionX-PLOR NIHSchwieters, Kuszewski, Tjandra and Clore