2M2C
Solution structure of Duplex DNA
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 2D 1H-1H NOESY | 1 mM GG28-1 | 95% H2O/5% D2O | 7.2 | 298 | |||
2 | 2D 1H-1H COSY | 1 mM GG28-1 | 95% H2O/5% D2O | 7.2 | 298 | |||
3 | 2D 1H-1H NOESY | 1 mM GG28-1 | 95% H2O/5% D2O | 7.2 | 298 |
NMR Spectrometer Information | |||
---|---|---|---|
Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | AVANCE | 500 |
2 | Bruker | DRX | 800 |
NMR Refinement | ||
---|---|---|
Method | Details | Software |
simulated annealing | AMBER_11,_DESMOND |
NMR Ensemble Information | |
---|---|
Conformer Selection Criteria | structures with the lowest energy |
Conformers Calculated Total Number | 8 |
Conformers Submitted Total Number | 8 |
Representative Model | 1 (lowest energy) |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
1 | refinement | AMBER_11,_DESMOND | 2.1 | Case, Darden, Cheatham, III, Simmerling, Wang, Duke, Luo, ... and Kollman |