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NMR solution structure of the two domain PPIase SlpA from Escherichia coli
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-15N HSQC 1 mM [U-99% 13C; U-99% 15N] SlpA, 100 mM potassium phosphate 90% H2O/10% D2O 0.1 7.5 ambient 298 2 2D 1H-13C HSQC aliphatic 1 mM [U-99% 13C; U-99% 15N] SlpA, 100 mM potassium phosphate 90% H2O/10% D2O 0.1 7.5 ambient 298 3 2D 1H-13C HSQC aromatic 1 mM [U-99% 13C; U-99% 15N] SlpA, 100 mM potassium phosphate 90% H2O/10% D2O 0.1 7.5 ambient 298 4 3D 1H-13C NOESY aliphatic 1 mM [U-99% 13C; U-99% 15N] SlpA, 100 mM potassium phosphate 90% H2O/10% D2O 0.1 7.5 ambient 298 5 3D 1H-13C NOESY aromatic 1 mM [U-99% 13C; U-99% 15N] SlpA, 100 mM potassium phosphate 90% H2O/10% D2O 0.1 7.5 ambient 298 6 3D 1H-15N NOESY 1 mM [U-99% 13C; U-99% 15N] SlpA, 100 mM potassium phosphate 90% H2O/10% D2O 0.1 7.5 ambient 298 7 3D HNCA 1 mM [U-99% 13C; U-99% 15N] SlpA, 100 mM potassium phosphate 90% H2O/10% D2O 0.1 7.5 ambient 298 8 3D HNCACB 1 mM [U-99% 13C; U-99% 15N] SlpA, 100 mM potassium phosphate 90% H2O/10% D2O 0.1 7.5 ambient 298 9 3D HN(COCA)CB 1 mM [U-99% 13C; U-99% 15N] SlpA, 100 mM potassium phosphate 90% H2O/10% D2O 0.1 7.5 ambient 298 10 3D HCCH-TOCSY 1 mM [U-99% 13C; U-99% 15N] SlpA, 100 mM potassium phosphate 90% H2O/10% D2O 0.1 7.5 ambient 298
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE 800
NMR Refinement Method Details Software simulated annealing TopSpin
NMR Ensemble Information Conformer Selection Criteria structures with the lowest energy Conformers Calculated Total Number 300 Conformers Submitted Total Number 10 Representative Model 1 (lowest energy)
Computation: NMR Software # Classification Version Software Name Author 1 collection TopSpin 2.3 Bruker Biospin 2 processing NMRPipe Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax 3 chemical shift assignment NMRView Johnson, One Moon Scientific 4 data analysis NMRView Johnson, One Moon Scientific 5 peak picking NMRView Johnson, One Moon Scientific 6 structure solution ARIA Linge, O'Donoghue and Nilges 7 refinement ARIA Linge, O'Donoghue and Nilges