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Solution Structure of the trans-membrane domain of the NS2A of dengue virus
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-15N HSQC 3 mg/mL protein, 44.4% [U-2H] chloroform, 44.4% [U-2H] methanol, 11.2% H2O 44.4% CDCl3/44.4CD3OH/11.2% H2O ambient 298 2 2D 1H-1H TOCSY 3 mg/mL protein, 44.4% [U-2H] chloroform, 44.4% [U-2H] methanol, 11.2% H2O 44.4% CDCl3/44.4CD3OH/11.2% H2O ambient 298 3 2D 1H-1H NOESY 3 mg/mL protein, 44.4% [U-2H] chloroform, 44.4% [U-2H] methanol, 11.2% H2O 44.4% CDCl3/44.4CD3OH/11.2% H2O ambient 298
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE 700
NMR Refinement Method Details Software torsion angle dynamics TopSpin
NMR Ensemble Information Conformer Selection Criteria structures with the lowest energy Conformers Calculated Total Number 100 Conformers Submitted Total Number 10 Representative Model 1 (lowest energy)
Computation: NMR Software # Classification Version Software Name Author 1 collection TopSpin 2.1 Bruker Biospin 2 processing TopSpin 2.1 Bruker Biospin 3 chemical shift assignment Sparky Goddard 4 structure solution CYANA Guntert, Mumenthaler and Wuthrich 5 refinement CYANA Guntert, Mumenthaler and Wuthrich