☰ Navigation Tabs
Refined solution structure of recombinant brazzein
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-15N HSQC 1-2 mM [U-13C; U-15N] protein, 5 mM sodium chloride 93% H2O/7% D2O 5 5.2 ambient 310 2 2D 1H-15N HSQC 1-2 mM [U-13C; U-15N] protein, 5 mM sodium chloride 93% H2O/7% D2O 5 5.2 ambient 310 3 2D 1H-13C HSQC 1-2 mM [U-13C; U-15N] protein, 5 mM sodium chloride 93% H2O/7% D2O 5 5.2 ambient 310 4 2D 1H-13C HSQC 1-2 mM [U-13C; U-15N] protein, 5 mM sodium chloride 93% H2O/7% D2O 5 5.2 ambient 310 5 3D 1H-13C NOESY aromatic 1-2 mM [U-13C; U-15N] protein, 5 mM sodium chloride 93% H2O/7% D2O 5 5.2 ambient 310
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Varian INOVA 600
NMR Refinement Method Details Software molecular dynamics NMRPipe
NMR Ensemble Information Conformer Selection Criteria structures with the lowest energy Conformers Calculated Total Number 100 Conformers Submitted Total Number 15 Representative Model 1 (lowest energy)
Computation: NMR Software # Classification Version Software Name Author 1 processing NMRPipe Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax 2 data analysis PIPP Garrett 3 peak picking PIPP Garrett 4 chemical shift assignment PIPP Garrett 5 collection VnmrJ Varian 6 backbone torsion angles TALOS Cornilescu, Delaglio and Bax 7 geometry optimization X-PLOR NIH Schwieters, Kuszewski, Tjandra and Clore 8 structure solution X-PLOR NIH Schwieters, Kuszewski, Tjandra and Clore 9 refinement X-PLOR NIH Schwieters, Kuszewski, Tjandra and Clore