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NMR solution structure of PA1075 from Pseudomonas Aeruginosa
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-13C HSQC aliphatic 0.5-0.7 mM [U-100% 13C; U-100% 15N] PA1075, 12.5 mM TRIS, 75 mM sodium chloride 90% H2O/10% D2O 165 7.0 ambient 298 2 2D 1H-13C HSQC aromatic 0.5-0.7 mM [U-100% 13C; U-100% 15N] PA1075, 12.5 mM TRIS, 75 mM sodium chloride 90% H2O/10% D2O 165 7.0 ambient 298 3 3D HNCA 0.5-0.7 mM [U-100% 13C; U-100% 15N] PA1075, 12.5 mM TRIS, 75 mM sodium chloride 90% H2O/10% D2O 165 7.0 ambient 298 4 3D HNCO 0.5-0.7 mM [U-100% 13C; U-100% 15N] PA1075, 12.5 mM TRIS, 75 mM sodium chloride 90% H2O/10% D2O 165 7.0 ambient 298 5 3D CBCA(CO)NH 0.5-0.7 mM [U-100% 13C; U-100% 15N] PA1075, 12.5 mM TRIS, 75 mM sodium chloride 90% H2O/10% D2O 165 7.0 ambient 298 6 3D HBHA(CO)NH 0.5-0.7 mM [U-100% 13C; U-100% 15N] PA1075, 12.5 mM TRIS, 75 mM sodium chloride 90% H2O/10% D2O 165 7.0 ambient 298 7 3D HCCH-TOCSY 0.5-0.7 mM [U-100% 13C; U-100% 15N] PA1075, 12.5 mM TRIS, 75 mM sodium chloride 90% H2O/10% D2O 165 7.0 ambient 298 8 3D CCH-TOCSY 0.5-0.7 mM [U-100% 13C; U-100% 15N] PA1075, 12.5 mM TRIS, 75 mM sodium chloride 90% H2O/10% D2O 165 7.0 ambient 298 9 2D 1H-15N HSQC 0.5-0.7 mM [U-100% 13C; U-100% 15N] PA1075, 12.5 mM TRIS, 75 mM sodium chloride 90% H2O/10% D2O 165 7.0 ambient 298 10 3D 1H-15N NOESY 0.5-0.7 mM [U-100% 13C; U-100% 15N] PA1075, 12.5 mM TRIS, 75 mM sodium chloride 90% H2O/10% D2O 165 7.0 ambient 298 11 3D 1H-13C NOESY aliphatic 0.5-0.7 mM [U-100% 13C; U-100% 15N] PA1075, 12.5 mM TRIS, 75 mM sodium chloride 90% H2O/10% D2O 165 7.0 ambient 298 12 3D 1H-13C NOESY aromatic 0.5-0.7 mM [U-100% 13C; U-100% 15N] PA1075, 12.5 mM TRIS, 75 mM sodium chloride 90% H2O/10% D2O 165 7.0 ambient 298
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Varian INOVA 600 2 Varian INOVA 800
NMR Refinement Method Details Software molecular dynamics CYANA
NMR Ensemble Information Conformer Selection Criteria target function Conformers Calculated Total Number 20 Conformers Submitted Total Number 20 Representative Model 1 (lowest energy)
Computation: NMR Software # Classification Version Software Name Author 1 structure solution CYANA Guntert, Mumenthaler and Wuthrich 2 data analysis Sparky Goddard 3 chemical shift assignment ABACUS Lemak and Arrowsmith 4 data analysis ABACUS Lemak and Arrowsmith 5 structure solution ABACUS Lemak and Arrowsmith 6 refinement CNS Brunger, Adams, Clore, Gros, Nilges and Read 7 processing NMRPipe Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax 8 processing MDD Orekhov 9 collection MDD Orekhov