2LUF
Retro Trp-cage peptide
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 2D 1H-1H NOESY | 0.03 % sodium azide | 60% H2O/10% D2O/30% TFE | 0.015 | 7.0 | ambient | 275 | |
2 | 2D 1H-1H TOCSY | 0.03 % sodium azide | 60% H2O/10% D2O/30% TFE | 0.015 | 7.0 | ambient | 275 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | AVANCE | 500 |
NMR Refinement | ||
---|---|---|
Method | Details | Software |
molecular dynamics | TopSpin |
NMR Ensemble Information | |
---|---|
Conformer Selection Criteria | structures with the lowest energy |
Conformers Calculated Total Number | 100 |
Conformers Submitted Total Number | 10 |
Representative Model | 1 (lowest energy) |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
1 | collection | TopSpin | Bruker Biospin | |
2 | processing | NMRPipe | Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax | |
3 | data analysis | Sparky | Goddard | |
4 | peak picking | Sparky | Goddard | |
5 | structure solution | ARIA | Linge, O'Donoghue and Nilges | |
6 | refinement | CNS | Brunger, Adams, Clore, Gros, Nilges and Read |