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NMR structure of major ampullate spidroin 1 N-terminal domain at pH 5.5
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-15N HSQC 1.5 mM [U-99% 13C; U-99% 15N] Major ampullate spidroin 1, 5 % [U-100% 2H] D2O, 0.03 % sodium azide, 20 mM sodium acetate, 20 mM sodium chloride 95% H2O/5% D2O 0.04 5.5 ambient 298 2 3D HNCA 1.5 mM [U-99% 13C; U-99% 15N] Major ampullate spidroin 1, 5 % [U-100% 2H] D2O, 0.03 % sodium azide, 20 mM sodium acetate, 20 mM sodium chloride 95% H2O/5% D2O 0.04 5.5 ambient 298 3 3D 1H-13C NOESY aliphatic 1.5 mM [U-99% 13C; U-99% 15N] Major ampullate spidroin 1, 5 % [U-100% 2H] D2O, 0.03 % sodium azide, 20 mM sodium acetate, 20 mM sodium chloride 95% H2O/5% D2O 0.04 5.5 ambient 298 4 3D 1H-13C NOESY aromatic 1.5 mM [U-99% 13C; U-99% 15N] Major ampullate spidroin 1, 5 % [U-100% 2H] D2O, 0.03 % sodium azide, 20 mM sodium acetate, 20 mM sodium chloride 95% H2O/5% D2O 0.04 5.5 ambient 298 5 3D 1H-15N NOESY 1.5 mM [U-99% 13C; U-99% 15N] Major ampullate spidroin 1, 5 % [U-100% 2H] D2O, 0.03 % sodium azide, 20 mM sodium acetate, 20 mM sodium chloride 95% H2O/5% D2O 0.04 5.5 ambient 298
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Varian INOVA 600
NMR Refinement Method Details Software torsion angle dynamics, simulated annealing CYANA
NMR Ensemble Information Conformer Selection Criteria target function Conformers Calculated Total Number 100 Conformers Submitted Total Number 20 Representative Model 1 (closest to the average)
Computation: NMR Software # Classification Version Software Name Author 1 structure solution CYANA 2.1 Guntert, Mumenthaler and Wuthrich 2 refinement CNS 1.2 Brunger, Adams, Clore, Gros, Nilges and Read 3 collection VnmrJ 2.1b Varian 4 chemical shift assignment CARA 1.9.0 Keller and Wuthrich 5 processing TopSpin Bruker Biospin 6 data analysis UNIO 2.0.2 T. Herrmann, F. Fiorito, J. Volk 7 peak picking UNIO 2.0.2 T. Herrmann, F. Fiorito, J. Volk 8 refinement CYANA 2.1 Guntert, Mumenthaler and Wuthrich