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NMR structure of the RNA binding motif 39 (RBM39) from Mus musculus
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-15N HSQC 1.2 mM [U-95% 13C; U-95% 15N] protein, 4.5 mM sodium azide, 50 mM sodium chloride, 25 mM sodium phosphate 95% H2O/5% D2O 0.083 6.0 ambient 298 2 3D 1H-13C NOESY aliphatic 1.2 mM [U-95% 13C; U-95% 15N] protein, 4.5 mM sodium azide, 50 mM sodium chloride, 25 mM sodium phosphate 95% H2O/5% D2O 0.083 6.0 ambient 298 3 3D 1H-15N NOESY 1.2 mM [U-95% 13C; U-95% 15N] protein, 4.5 mM sodium azide, 50 mM sodium chloride, 25 mM sodium phosphate 95% H2O/5% D2O 0.083 6.0 ambient 298 4 3D 1H-13C NOESY aromatic 1.2 mM [U-95% 13C; U-95% 15N] protein, 4.5 mM sodium azide, 50 mM sodium chloride, 25 mM sodium phosphate 95% H2O/5% D2O 0.083 6.0 ambient 298 5 4D APSY HACANH 1.2 mM [U-95% 13C; U-95% 15N] protein, 4.5 mM sodium azide, 50 mM sodium chloride, 25 mM sodium phosphate 95% H2O/5% D2O 0.083 6.0 ambient 298 6 5D APSY CBCACONH 1.2 mM [U-95% 13C; U-95% 15N] protein, 4.5 mM sodium azide, 50 mM sodium chloride, 25 mM sodium phosphate 95% H2O/5% D2O 0.083 6.0 ambient 298 7 5D APSY HACACONH 1.2 mM [U-95% 13C; U-95% 15N] protein, 4.5 mM sodium azide, 50 mM sodium chloride, 25 mM sodium phosphate 95% H2O/5% D2O 0.083 6.0 ambient 298 8 2D 1H-13C HSQC 1.2 mM [U-95% 13C; U-95% 15N] protein, 4.5 mM sodium azide, 50 mM sodium chloride, 25 mM sodium phosphate 95% H2O/5% D2O 0.083 6.0 ambient 298
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE 600 2 Bruker AVANCE 800
NMR Refinement Method Details Software molecular dynamics CARA
NMR Ensemble Information Conformer Selection Criteria target function Conformers Calculated Total Number 80 Conformers Submitted Total Number 20 Representative Model 1 (lowest energy)
Computation: NMR Software # Classification Version Software Name Author 1 chemical shift assignment CARA Keller and Wuthrich 2 data analysis CARA Keller and Wuthrich 3 refinement OPALp Luginbuhl, Guntert, Billeter and Wuthrich 4 structure solution CYANA Guntert, Mumenthaler and Wuthrich 5 data analysis TopSpin Bruker Biospin 6 collection TopSpin Bruker Biospin 7 processing TopSpin Bruker Biospin 8 chemical shift assignment UNIO Unio Herrmann Wuthrich 9 structure solution UNIO Unio Herrmann Wuthrich