2LMA
Solution structure of CD4+ T cell derived peptide Thp5
SOLUTION NMR
NMR Experiment | ||||||||
---|---|---|---|---|---|---|---|---|
Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 2D 1H-1H NOESY | 1 mM protein-1 | 90% H2O/10% D2O | 200 | 6.8 | ambient | 298 | |
2 | 2D 1H-1H TOCSY | 1 mM protein-1 | 90% H2O/10% D2O | 200 | 6.8 | ambient | 298 | |
3 | 2D 1H-15N HSQC | 1 mM protein-1 | 90% H2O/10% D2O | 200 | 6.8 | ambient | 298 | |
4 | 2D 1H-13C HSQC | 1 mM protein-1 | 90% H2O/10% D2O | 200 | 6.8 | ambient | 298 |
NMR Spectrometer Information | |||
---|---|---|---|
Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | AVANCE | 500 |
NMR Refinement | ||
---|---|---|
Method | Details | Software |
distance geometry | TopSpin |
NMR Ensemble Information | |
---|---|
Conformer Selection Criteria | target function |
Conformers Calculated Total Number | 100 |
Conformers Submitted Total Number | 40 |
Representative Model | 1 (closest to the average) |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
1 | collection | TopSpin | 2.1 | Bruker Biospin |
2 | processing | TopSpin | 2.1 | Bruker Biospin |
3 | data analysis | CARA | 1.8.4 | Keller and Wuthrich |
4 | chemical shift assignment | CARA | 1.8.4 | Keller and Wuthrich |
5 | peak picking | CARA | 1.8.4 | Keller and Wuthrich |
6 | structure solution | CYANA | 2.1 | Guntert, Mumenthaler and Wuthrich |
7 | refinement | CYANA | Guntert, Mumenthaler and Wuthrich |